Salvia miltiorrhiza (redroot sage): 130987221
Help
Entry
130987221 CDS
T09291
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03030
DNA replication
smil03420
Nucleotide excision repair
smil03430
Mismatch repair
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130987221
03420 Nucleotide excision repair
130987221
03430 Mismatch repair
130987221
03440 Homologous recombination
130987221
03460 Fanconi anemia pathway
130987221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
130987221
03032 DNA replication proteins [BR:
smil03032
]
130987221
03400 DNA repair and recombination proteins [BR:
smil03400
]
130987221
Transcription factors [BR:
smil03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130987221
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130987221
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130987221
MMR (mismatch excision repair)
130987221
DSBR (double strand breaks repair)
HR (homologous recombination)
130987221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
130987221
NCBI-ProteinID:
XP_057766867
LinkDB
All DBs
Position
1:complement(46765440..46769409)
Genome browser
AA seq
638 aa
AA seq
DB search
MPVNLTANAIAAIIGGDVNAKPLVQVLEIKLIGSTQERYRLIISDAVATEQAMLASQLND
RVKTGRIRKGSVIQLIEYICSPVQNRKIIVVLNMETIIPDCDVIGNPMYSESDSVPGKPA
SSGPRPSINNSVSGAHNSSRTSYNNGKTSSSLNQGGMQSFHPTVQPPYQPPPNYKNHGAI
MRNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIR
VTCFNAVVDRFYDTIDVGKVYVISKGSLKPAQKNFNHLKNEWEIFLETTSSVDLCPDEDT
SIPRQQFSFRPICEIEHAESNSILDVIGVVVTVNPSVPIMRKNGMETQRRILNLKDNSGR
TVELTLWGDFCNREGQQLHDMVETGTFPILAVKAGKVNDFSGKSIGTISATQLFINPDFP
EANGLRTWFDRGGKDTASHSISREATLGGMKNETRKCLTQIKDEGLGRSDKADWIAVKAS
VSFLKTDSFCYTACPLMIGDRQCNKKVTKSGNSTWLCDRCNQEFEECDYRYLLQVQVQDH
SALTWVTAFQEAGEEILGCSAKQLYVWKNEMQDDLKFLEVIQNCLFREFIFKLKIKEETY
GDEQKVKITVVKAEKLNYSEESRFLLDSISKLHLAKYY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatttgacggccaacgctattgcggcaataatcggcggagacgtcaacgcg
aagccgctggtgcaggtgttggaaatcaagctcatcggctccacgcaggagcgttaccgc
cttatcatatccgacgcggtggctactgagcaagctatgctcgcctcgcagctcaatgac
cgagttaagaccggccgaatccgcaagggatccgtcatccagctcatcgaatacatctgc
agtcccgtccagaaccgcaagataattgtggtattaaacatggaaactatcattccggac
tgcgatgtaattggtaacccaatgtattctgaatctgattcagtgcctggaaagccagca
tcttctggaccccgaccatcaataaacaatagtgtttccggtgctcataattcatcacga
acaagctacaacaatggtaaaacttcaagctccctaaaccaaggtggcatgcagagtttc
catcctaccgttcagcctccataccaaccacctccaaattataagaatcatggagcaatc
atgaggaatgaggcccctgcacgcattatacctatagctgccttgaacccttatcaaggt
agatgggctatcaaggcacgggtgacagcaaaaggagatcttcggcgttacaacaatgca
agaggagatgggaaagtattctcctttgatcttcttgattcagatggaggggaaatcagg
gtgacatgcttcaacgctgtggttgaccgtttttatgatactattgatgttggtaaagtc
tatgttatatctaaaggtagcttgaaacctgcccagaagaatttcaaccatctaaagaat
gagtgggagatatttctagagacaacctcatcagtggatctttgtccagatgaagatact
tccatacctaggcagcagttctcatttaggcctatttgtgaaattgagcatgctgaaagc
aattctatactggatgttattggtgttgttgtaaccgtgaacccttctgttcccatcatg
agaaagaatggaatggaaacacagaggcgaattctgaacttgaaggataattcggggcga
actgttgaattgacgttatggggagatttctgcaatagggaaggacaacaactgcatgat
atggtagaaaccggaacattccccattttggctgtcaaagctggaaaagttaacgacttt
agtgggaagtccatcggcaccatatctgccacacagctattcataaatcccgactttcca
gaggctaacggcttgagaacctggtttgatcgaggggggaaagacaccgcttcccattct
atatccagagaagctacacttggtggaatgaagaacgagacacgcaagtgcttgacgcag
ataaaagacgaagggctgggaaggtcagacaaagcagactggattgcagttaaggcaagt
gtctcttttctgaaaacagactcattctgttacacagcctgcccattgatgatcggtgac
aggcagtgcaacaagaaagtgacaaagtccgggaactcgacatggctatgcgacaggtgc
aatcaagaattcgaagagtgcgattacagataccttcttcaagttcaggttcaggaccac
agcgccctgacgtgggtgactgctttccaggaagccggtgaagagatcttgggctgctcg
gccaagcagctgtacgtgtggaaaaacgaaatgcaagatgacctcaaatttcttgaagtt
attcaaaactgcctcttcagagagttcatctttaagctcaaaataaaagaggagacttat
ggtgacgaacagaaggtgaagatcacagtcgtcaaggcagagaagttgaactactctgaa
gagagtagatttctgcttgatagcatctcaaagctccatttagctaaatactattag
DBGET
integrated database retrieval system
