Salvia miltiorrhiza (redroot sage): 130987410
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Entry
130987410 CDS
T09291
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130987410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
130987410
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130987410
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
AAA_16
AAA_19
Helicase_C_2
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
130987410
NCBI-ProteinID:
XP_057766917
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Position
6:20934216..20937030
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AA seq
767 aa
AA seq
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MDAGGTVSRRTRSQLDAYYRRLHDTIKNPDGGGTTIKGIQESEIRVDDDDDDEMKKKRKY
KAGSKKRARKLDLDFGDARENEESGLPLKFKLDDEQSPKTESEMEIDRLFDDLELGLWES
TRTTDFDECSDVDQSPAARCSRNDHDEFLDEQIGIVCRFCHTLLLHIKYVFPPFCVESPE
QSEWNCSSLEEESKNVDDDDEFKMSSDCGNLEWYSSSDIPSRGTVFDLIPSSDKEELYPH
QLEGFEFIWRNIAGDIHLNNILRGGAGAGGGCIISHAPGTGKTRLTIVFLQTLMRLYPKC
RPLIIAPRGMLLTWEHELKLWKAGIPFHNLNEAAGHARSLKILSWVKGGSILGASYRLFE
ELARCKDRFEQTLLESPSLVVLDEGHTPRNDHTLIWKALTRLATRRRIILSGTPFQNNFD
ELYNTLSLVNPRFIMKSRRGRGRKRKQMNEWDSLTRDDQGIKKLRAMIQPFVHIHKGTIL
HETLPGLKDSLIILKPTPLQQKLLEQNIARNPNFLEQSHLASLISVHPSLVAQVAAFANH
KSKLKSLQSDPNAGVKTRFLINLIEISSRIHEKVLIFSEFIKPLLHIKKLLECHLGYKQG
REVMYIDGDLSMTQRQRLITNFNDKNGRAKVLLASQRACCEGISLVGASRVVLLDVSWNP
SVERQAVCRAYRLGQEKMVYVYHLITLMEANKYARQTEKDRISELVFSEGERASASCGGG
VCEDKVLEAMVHHQGCGAMFERIVHQPKDSDLVKTFGFVDYLDSSTF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggaggtacggtctcgcggcggacaaggagccagttggacgcctactacagg
cgcctccacgacaccatcaagaatcccgacggcggcggcaccaccatcaaaggcattcaa
gaatctgagattcgtgtagatgatgatgacgatgacgagatgaagaagaagcgcaaatac
aaagcgggaagcaagaaaagggctcggaagcttgatttggattttggtgatgcgagagag
aatgaagaaagtggtctgcctttgaagttcaagttggatgatgagcagtcgcccaaaact
gagtcggagatggaaatcgatcgtctctttgatgatttagaactcggactttgggaatcc
acacgcacgactgattttgatgaatgcagcgatgtggatcaatctccagccgcccgatgc
agccggaacgatcacgatgaatttcttgatgagcaaatcggcatcgtatgcagattttgc
catactctcttactccacatcaaatacgtcttcccgcctttttgtgtggaatccccagag
cagagcgaatggaattgcagtagtttggaagaagaatccaagaatgttgatgatgatgat
gagtttaagatgagctcagattgtgggaatttggagtggtatagtagtagtgatattcct
tcaagaggcacagtttttgatctgattcccagctccgacaaagaggagctgtatccgcat
cagttggaaggattcgagttcatatggaggaacatagccggagacatccacctcaacaat
atcctccggggcggggccggggccgggggcgggtgcataatctcccatgcccccggcacg
ggcaagacccgcctcaccatcgtcttcctccagacgctgatgaggctgtaccccaagtgc
cgccccctcatcatcgccccccgtggcatgctcctcacctgggagcacgagctcaagttg
tggaaggccgggatccccttccacaacttgaacgaggctgcgggccacgccagatcgctc
aagatcctctcctgggtcaaagggggcagcatcctcggagccagctaccgcctcttcgag
gagctggcccgctgcaaggacagattcgagcagacactgctcgaatcccccagcctcgtc
gtgctggacgagggccacacgcctagaaacgatcacaccttgatctggaaggccctcacc
aggctggccacgcggcgccgcatcatcctctccggcacgcccttccagaacaacttcgac
gagctctacaacaccctctccctcgtcaacccgcgattcatcatgaaatcgcggagaggc
agagggaggaaaaggaagcagatgaatgagtgggacagtctgacgagagatgatcaaggg
atcaagaagctaagagcaatgatccaaccctttgtccacatacacaaaggcaccatccta
cacgagaccctcccaggcctcaaagactccctcatcatactaaaaccaactcccctgcag
cagaagcttctagaacaaaacatagcccgcaaccccaactttctagaacaatcccacctc
gcctccctcatctccgtccacccctccctcgtcgcccaagtggctgccttcgcgaaccac
aagagtaagctcaagtcgctccaatcagaccccaacgcgggggtgaaaacgcgcttcttg
atcaacctcatcgagatctcatcaagaatccatgagaaagtcctcatcttcagcgagttc
atcaagccattgctccacatcaagaagcttctagaatgccatttgggctacaagcaaggg
cgcgaggtgatgtacattgacggcgacctgagcatgacgcagaggcagaggttgatcacc
aacttcaacgataagaatgggagggccaaggtgctgctggcctcgcagagggcctgctgc
gaggggataagcctagtcggggcttcaagagtcgtcttgctcgacgtctcgtggaacccc
tcggtggagaggcaggccgtgtgcagggcatacaggctagggcaggagaagatggtttat
gtctaccatttgatcacgttgatggaggccaacaagtatgctaggcagacggagaaggat
cggatttcggagctcgtttttagcgagggggagagagcttccgcttcctgtggcgggggg
gtgtgtgaagataaagtgctggaagccatggttcatcatcaaggttgtggagccatgttt
gagaggattgttcatcagcctaaggactctgatttggtcaagacttttggctttgtggat
tatcttgattcttcaactttttaa
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