Salvia miltiorrhiza (redroot sage): 130987536
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Entry
130987536 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130987536
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
130987536
Enzymes [BR:
smil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130987536
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130987536
Prokaryotic type
130987536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
130987536
NCBI-ProteinID:
XP_057767073
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All DBs
Position
6:complement(22793917..22799973)
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AA seq
515 aa
AA seq
DB search
MRSFVPKRLTMAASLHLNLLHHLRRCKPLYASWSPPLRVFSKRLLSAPATPYPLQYDMII
ARPANSPHRHPARRRSPIAAASQPQSSAELGFNEWVDKKLSSKETDNTSTELTMDKSKRK
YYNKRRKRMYGESESDEESRGGGEGDFIELKQEVVELRTLHKREEELYFYDAFAYPWEKN
KHYKMVYQMEKKFFPDQCFDRAFLEPGKANAKQGKREMRCGAVKGEAGDERGLVFFDEKD
GGGEEVKGVDVSEKKVEDFFKCLKKVPNENSGAVAPEPFLSTRTAGLPPKWDGPNGTVLL
VNKPKGWTSFTVCGKLRRLVNVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMLKGY
SGTFRLGEATSTWDADSPVIQRESWEHIKDEDIKKSAASFCGEIWQVPPMFSAIKVGGER
MYEKARKGESIELSPRRISIFQFDVERSLEDRQNVIFRVTCSKGTYIRSLCADFGKALGS
CAHLTALRRDSIGEYSADDAWEFQELEEEITKGYI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagaagctttgttccaaagagattaacaatggcggcatcgctgcacctaaatctactc
caccacctccgccgctgcaagccgctctacgcttcttggtcaccgccactccgcgtcttc
tccaaaagactcctatccgcccccgccactccatacccactgcaatatgatatgattatc
gcccgccccgctaactctcctcaccgccaccccgcccgccgccgctctcccatcgccgca
gcttcccagccccaatcctccgccgaattaggcttcaacgagtgggtcgacaagaagctc
tccagcaaagaaaccgacaacaccagcaccgaattaacaatggacaaatccaagagaaaa
tactacaataaaaggaggaagagaatgtacggagaatcggaatcggatgaggaaagccgc
ggcggcggcgagggcgatttcatcgaattgaagcaggaagtggtggagctccgcaccctg
cataagagggaggaggaattgtatttctacgacgccttcgcttacccgtgggagaaaaac
aagcactacaaaatggtgtatcaaatggagaagaagtttttcccggatcaatgcttcgat
agggcgtttttggagccggggaaggcgaatgcgaagcaggggaagagggaaatgaggtgt
ggagctgtgaagggtgaggctggggatgagagagggttggtgttttttgatgagaaagat
ggaggaggtgaggaagtgaagggtgtagatgtgagtgagaagaaagtggaggatttcttc
aagtgtttgaagaaagtccccaatgagaatagtggtgctgttgcgccggagccgtttctt
tcgactaggaccgctggccttccgcccaagtgggatggccccaatgggactgtgcttttg
gttaacaaacctaaaggttggacttcatttacagtgtgtgggaagctgcgacgcctggtt
aatgtgaagaaggtgggccatgccggaaccctagatcccatggcaacgggcctgttgatt
gtatgtgtaggtaaagctaccaaggtggttgacagatatcagggcatgttaaagggatac
agtggaaccttccgtttgggggaagctacctcaacctgggatgcagattcacctgtaatc
caaagggagtcatgggaacacatcaaggacgaggatataaagaaatctgctgcgtcgttt
tgtggagagatatggcaagttccacccatgttctctgctattaaagtcggaggagagagg
atgtacgagaaagctagaaaaggtgaaagcattgaactttctcctagaaggatttcaatc
ttccaattcgacgttgaaagaagtttagaagacagacaaaatgtgattttccgagtgact
tgctcgaaaggaacttatattcgttcactttgtgctgattttgggaaggctctggggagc
tgcgcgcatttaacagccctacgcagagattcaattggtgaatattcagcagatgatgcg
tgggaatttcaagagctggaagaagaaattaccaaaggatatatctag
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