Salvia miltiorrhiza (redroot sage): 130987561
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Entry
130987561 CDS
T09291
Name
(RefSeq) DNA damage-binding protein cmr1 isoform X1
KO
K24755
WD repeat-containing protein 76
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130987561
03036 Chromosome and associated proteins [BR:
smil03036
]
130987561
03400 DNA repair and recombination proteins [BR:
smil03400
]
130987561
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130987561
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130987561
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
130987561
DSBR (double strand breaks repair)
Other DSBR factors
Others
130987561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
130987561
NCBI-ProteinID:
XP_057767120
LinkDB
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Position
6:complement(250254..253199)
Genome browser
AA seq
496 aa
AA seq
DB search
MGSKGKMTDYERRRLENIKRNDEMLAALKIRSKLNDLSTASAKRSSSGGSKSYKRSPAKK
PKTETPVVLRRSLRARGVPPDAATANGLDDDVDIEKQINKSQTMNSNSAPNVSPRKQGPI
RMHDSYIGEDGLDNKLLELVKGCSREGLLNESGSVSYDSVDNIEGCKTSKIGKSSWGHVE
ELELKPENVARVVPGRIMSLRFFPTRDMQMVAVGNKFGDIGFWHVNGKEEDGDGIYLYHP
HAGPVSGIVIDPFCISKMYSSCYEGFIRMMDVEKGVFDMVYHSEYCIYSISLSPRDVKSL
YFGEGRGGFHKWDVRTGKSSLSCDLHGDRINSIDFNSETENIMATSSTDGTACIWDLRLM
NKDKTTPLKTINHKRAVHSAYFSPSGKFLATTSYDDNVGLISGANYENTSMVYHYNQTGR
WLSTFRGVWGWDDTSIYIGNMKRGVDVISVGGERVVATLQSDSMSAIPCRFDPHLYNVGV
LASATSGGQVYIWTQP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaagggtaaaatgacagactatgagcggcggaggctggaaaacataaagcga
aatgacgaaatgctggcggcgctcaagatccgctcgaagctcaacgacctctccaccgct
tccgccaaacgcagcagcagcggtgggagcaagtcgtataaacgtagtccagcaaagaag
cccaaaactgaaactccggtagtactgcgccggtcgcttagggcacgtggggtgccgcct
gatgctgctactgcgaatggccttgacgatgatgttgatatcgagaagcagattaacaaa
tcccaaaccatgaattccaactcggcgcccaacgtatcccctcgaaagcaggggcccatt
agaatgcacgattcatacataggtgaggatggattggacaacaaactcttagaacttgtt
aagggatgttctcgggaaggcctactgaatgagagtggttcagtttcatatgattccgtt
gataatattgaaggctgcaagacttctaaaattggaaagagttcatggggtcatgtggag
gagttggaattgaagcctgagaatgtagcacgggtggttcctgggagaattatgagtttg
aggtttttccctactcgggacatgcaaatggttgctgttggaaacaaatttggagatatc
gggttttggcatgttaatggcaaggaagaggatggtgatggaatttatttgtaccaccca
catgcagggcctgtttctggaattgtgatagacccgttttgcatatcaaagatgtatagc
tcatgctacgaaggttttatcaggatgatggatgtggagaaaggggtgtttgatatggta
tatcatagtgagtactgtatatactctatatcactaagtccccgtgacgtgaagtcctta
tactttggtgagggcaggggaggatttcataagtgggatgtgagaacaggaaaatcttct
ttgtcgtgcgatttacatggagatagaatcaacagcatagactttaactcagagactgag
aatatcatggctacaagttccactgatggcactgcttgtatttgggatctgagactcatg
aacaaagataaaacaaccccgctgaagaccattaatcataaaagagctgtacattctgct
tacttttcaccttcagggaagtttctagcaacaacaagctacgatgacaacgttggtttg
ataagtggagctaattacgagaacacttctatggtataccactacaaccaaacaggcaga
tggttgtccacattcagaggcgtatggggttgggacgacacatctatctacattggaaac
atgaagagaggagttgatgtcatttctgttggtggggaaagagttgttgcaaccttacaa
agtgacagcatgtcggctattccatgccggtttgatccacatctgtacaacgtaggtgtg
cttgcaagtgccacaagtggaggccaggtttacatttggactcagccgtaa
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