Salvia miltiorrhiza (redroot sage): 130987797
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Entry
130987797 CDS
T09291
Name
(RefSeq) SWI/SNF complex component SNF12 homolog isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130987797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smil03021
]
130987797
03036 Chromosome and associated proteins [BR:
smil03036
]
130987797
Transcription machinery [BR:
smil03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130987797
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130987797
PBAF complex
130987797
GBAF(ncBAF) complex
130987797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130987797
NCBI-ProteinID:
XP_057767461
LinkDB
All DBs
Position
6:complement(1913769..1917145)
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AA seq
541 aa
AA seq
DB search
MNQHNPNSNNNPIRGNISFANAGGTQMQMQMQMPIQISMNNNQQQVPHQSHLQHAGRPYF
TGHFQLSEAQPQVFVQAQSGQVQAPSQILASPQGNANISISSPPVSTPGSGVAGTAKRLH
KPPSRPSGGASGQGTASPMKTMELAPAVRRGKRKLPDKVIPEKVAALFPECALYTQLLEF
ESRVDAALVRKKTDITESLKNPVRVQKFLRIYVFNTYANQTDTSTDKGNSEPPSWSLRLI
GRILEDGKDPIVEGQMKKPKCSYPKLSSFFKKITIYLDQNLYPDNHVILWESSRSPALHE
GFEVKRKGDKEFTAIIRLEMNYEPERFKLSPALQEVLGIEVETRPRIMAALWQYVKTKKL
QIPGEASFFMCDPPLRKVFGEDKLKFSTVPQKITPHLTPPGPIHLEHRVKLSGVSPSGNT
CYDVLVDVPLSLEGKSTFLTSLEQNQSIDSCDEAISSALKKIHEHCRRRAFFLGFSQSPA
EFINALITSQARDLKVASADAGRDAEKERRAEFYDQPWIEDAVIRYLNRKPAVGSDAAGN
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcataatccaaacagcaataacaatccgattcgaggaaatataagttttgca
aatgcaggggggacgcagatgcaaatgcaaatgcagatgccgatacaaatatccatgaac
aataaccaacaacaggtaccccatcagtctcatcttcagcatgcgggaaggccctatttc
acaggacatttccaactatctgaagctcaacctcaggtatttgtccaagctcagtctggg
caagttcaagctccttcacaaatcttggcctcaccccagggaaatgctaacatcagcatc
tcatcccctcccgtgtccacaccgggttctggtgtggctggaacagccaagcgccttcac
aagcctccttctcggccttctgggggagcctctggccagggcaccgcttctcctatgaaa
actatggaattggcccctgctgtgcgtagagggaagcgaaagcttcctgataaagtaatt
ccagaaaaagttgcagcattatttccagaatgtgctctttacactcaattgcttgaattt
gagtctcgtgtagatgctgcacttgtaagaaagaagactgacattacggaatctctgaaa
aaccctgtccgggttcaaaagtttcttcgcatatatgtcttcaatacttatgctaaccaa
acagatacaagtacagataagggaaattctgagccaccttcatggtctcttaggctaatt
ggacgaattttagaagatggcaaggatcccattgtggaaggacagatgaagaaaccaaag
tgttcgtatccaaagttatcatcttttttcaagaaaatcactatatacttggatcagaat
ttgtatcctgataatcatgtgatcttatgggagagttctcgatcaccagcgcttcatgaa
ggttttgaggtgaagagaaaaggcgacaaggagttcacagcaattattagattggagatg
aattatgaacctgaaaggtttaagttgtctccagcattgcaggaagttcttgggattgag
gtggagacacgtcccagaataatggcggcactttggcaatatgtaaagacgaaaaaattg
caaattcccggtgaagcttcttttttcatgtgtgatccgcctctaaggaaggtttttggt
gaagataaattgaaattctccactgttcctcaaaagattacaccgcacctcactccacct
gggcccatacatttggagcatagggtgaagctttccggggttagtccatctgggaatact
tgttatgatgttctggttgacgttccattgtcactagagggtaaatcgactttcttgact
agtttagagcagaaccaatcgattgattcttgtgatgaagctatttcttctgctttgaag
aagatacacgagcattgccgccggcgtgctttctttcttggatttagtcagtcacctgca
gagttcataaatgccttgatcacttctcaagccagggatttgaaagttgcttctgccgat
gctggccgtgatgcagagaaagagcgtcgggcagaattctatgatcaaccatggattgag
gatgcggttatccggtacttaaatcgcaagcctgctgttggaagtgacgctgctggaaac
aagtag
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