Salvia miltiorrhiza (redroot sage): 130988172
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Entry
130988172 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03440
Homologous recombination
smil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130988172
03460 Fanconi anemia pathway
130988172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
130988172
04121 Ubiquitin system [BR:
smil04121
]
130988172
03400 DNA repair and recombination proteins [BR:
smil03400
]
130988172
Membrane trafficking [BR:
smil04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
130988172
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130988172
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
130988172
RecA family proteins
130988172
FA (Fanconi anemia) pathway
Other FA pathway factors
130988172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
130988172
NCBI-ProteinID:
XP_057767940
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All DBs
Position
1:complement(47901901..47904724)
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AA seq
345 aa
AA seq
DB search
MSLMDQQGRNRPLVQEQPEESEDIQHGPFPVEQLQASGIAAIDIKKLKDAGLCTVESVAY
SPRKELLQIKGISDAKVDKIIEAASKLVPLGFTSATQLHAQRLEIIQITSGSKELDKILE
GGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQI
ADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSG
RGELSARQMHLAKFLRSLQKLADEFGIAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAH
ATTTRLALRKGRGEERICKVVSSPCLAEAEARFQICTDGVTDVKD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgatggatcagcagggaaggaacaggcctttggtgcaagaacaaccagaggaa
tcggaagatattcagcacggccctttccctgttgaacaacttcaggcatccggaattgct
gctatcgacatcaaaaagctcaaagatgcagggttgtgcactgtggaatcagtggcatac
tctccaaggaaagagcttctgcaaataaaaggaattagtgatgcaaaagttgataagatc
attgaggcagcttcgaaattggtccctttgggctttacaagtgccacccaactacatgct
cagaggcttgaaataattcaaataacgtctggatctaaagaactggacaaaattttggaa
ggaggggtcgaaacagggtctataactgaactatatggggagttccgctctggaaagact
caactatgccatacgctttgtgtgacttgccaactaccattagatcaaggaggtggtgag
gggaaagctatgtacattgacgctgaagggacattcagaccacagagattacttcagata
gcagacaggtttgggctgaatggtgctgatgtcttggagaatgtggcctatgcccgagct
tacaacactgaccatcagtcgaggcttctgcttgaagctgcatcgatgatggtggagacc
aggtttgccctcatgattgtagacagtgctactgctctttataggacagatttctccgga
agaggggaattgtcagcaaggcaaatgcatcttgcaaagttcttgaggagccttcagaag
ctagccgatgagtttgggattgctgttgttataactaaccaagttgtggcacaagtggat
ggttcggccgtttttgctggtcctcaaatcaaacccattggtggcaacatcatggcgcat
gctacaacaacaagactagctttgagaaaaggaaggggagaggagcgtatatgcaaagta
gtgagctcgccatgtctcgctgaagctgaagccagatttcagatatgcacagatggagta
acagatgtaaaggattaa
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integrated database retrieval system
