Salvia miltiorrhiza (redroot sage): 130988186
Help
Entry
130988186 CDS
T09291
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00531
Glycosaminoglycan degradation
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130988186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
smil00536
]
130988186
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
130988186
Glycosaminoglycan binding proteins [BR:
smil00536
]
Heparan sulfate / Heparin
Enzymes
130988186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
130988186
NCBI-ProteinID:
XP_057767951
LinkDB
All DBs
Position
6:5657179..5660413
Genome browser
AA seq
533 aa
AA seq
DB search
MGSLVLQMGWWVLVVCVSYVQAIVSIEGSVFIDGKMPIANTDDDFICATLDWWPPEKCDY
GTCSWGHASLLNLDLKNTVFLNAVKAFSPLKIRLGGTLQDKVIYETEDESQPCIPFAKNS
SIMFGFTNGCLPLSRWDELNSFFNESGALVVFGLNALRGKSIQSGTAVGPWDYTNAASLI
RYTVKKGYKIYGWELGNELSGRGIGVGISADQYASDTVALHDLVEEIYKEVDIRPQIIAP
GGFFDAGWFQQFLAKTVGSVDVITHHIYNLGPGSDEHLVDRILNPSVLESGGDVFRNLHN
VVRTSPNSAAAWVGEAGGAYNSGHDGVTNAFVFSFWYLDQLGRSSTYDTKTYCRQTLIGG
NYGLLNTTTFIPNPDYYSALLWHRLMGRQVLSTTFNGTKTIRAYAHCAKHSQGITLLLIN
IDGNTTVRAKVDFNGTLNHHHHHKHRHHRSRGNLLRHRKQMSEAVREEYHLTPMGGNIRS
RTVMLNGKALSVDSSGTIPSLQPVRVNSSELITVAPYSIVFVGMPNVSIPACM
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggttctttggttttacaaatggggtggtgggtgttggtggtgtgtgtgagctatgtg
caggctattgtgagcattgaaggcagtgtttttattgatgggaagatgcccattgcaaat
acagatgatgatttcatttgtgcaactttggattggtggccacctgagaagtgtgattat
gggacttgtagctggggccatgcttctctgctcaacttggatctcaagaatacagtcttc
ctaaatgctgttaaagcattttcaccattgaagatcagattgggtggcaccttgcaagac
aaagtcatctacgagacagaagacgaatcacagccctgcattccgttcgccaagaactct
tccatcatgttcggtttcaccaatggctgcctgccattgtctagatgggatgagctgaat
tccttcttcaatgaatcaggggctcttgttgttttcggattgaatgctctacgtggaaag
tctatacaatctggtactgcagtaggcccgtgggattacacgaatgctgcatctctcatt
cgttatactgtgaaaaagggctacaagatttatggttgggaacttggaaatgaactgagt
ggaagaggaatcggggttggaatttctgcggatcagtatgcatctgacacagtcgctcta
catgacttagtcgaggaaatatacaaggaggtcgatatcagaccacagatcatcgcgcct
ggagggttctttgatgctggctggttccagcagtttctagctaaaacagtaggatcagtg
gatgtgatcacacaccacatatataatcttggccctggaagtgatgagcaccttgtagat
aggattctgaatccatctgttctcgagagtggaggcgacgtgttcaggaacctccacaac
gtggtcaggacttcgccaaactcagctgccgcctgggttggtgaggccggaggggcttat
aacagcggccacgatggagtcacaaatgctttcgtgttcagcttctggtacttggatcaa
ctaggtcgatcttccacttacgacacgaaaacatactgcaggcagacgttgattgggggt
aactatggcttgctcaacaccaccacattcatcccaaatccagactactatagcgctctc
ctttggcaccggttgatgggtaggcaagtcctgtcaaccaccttcaacgggaccaagaca
atccgagcatacgcacattgtgcaaagcactctcaagggatcacactgctactaataaac
atcgatgggaacacgaccgtgagggcgaaagtcgacttcaacgggacgttgaaccaccac
caccaccacaagcacaggcatcatagatcaagagggaatctgctgcgtcaccggaaacaa
atgtctgaagctgtgagagaagagtaccatctgactccaatgggtggcaacatacggagc
cgtacggttatgctgaacgggaaggcgctgagcgtcgactcgtcggggaccataccttcc
ctgcagcctgttagggtgaattcatcggagctgataacagtggccccttactccattgtg
tttgttggcatgcctaatgtttctatccctgcatgcatgtag
DBGET
integrated database retrieval system
