Salvia miltiorrhiza (redroot sage): 130988307
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Entry
130988307 CDS
T09291
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130988307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
130988307
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130988307
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
COX_ARM
Motif
Other DBs
NCBI-GeneID:
130988307
NCBI-ProteinID:
XP_057768103
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Position
6:complement(7058574..7067977)
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AA seq
1066 aa
AA seq
DB search
MQRQKSILSFLKKPEASAGGKPTVADGEIRGTDTPPEKVPRRIFSDSRPSLFSSIKHKFA
KVDNSTNSSSNTRCDGDENFTIRSLPLRFDASEDLGNGYLVSKQPSDQHVLSSSRTVCPE
GGKGSLFLKTLEDDVLGPETPGMRPLVPRLKRVQEDIYNLEEKADFSLQDNRKRMKLEQA
SDVSKKIHDEDCDTVSKFEWLHKSRIKDANGRKPMDPLYDKRTLYIPPEALGKMSASQKQ
YWDVKRQYMDVILFFKVGKFYELYELDAEIGHKELDWKITQSGVGKCRQVGVSESGIDDA
AQKLIARGYKVGRIEQLETSEQAKSRGSTSVIRRKLVHVQTPATTTEGNIGPDAVHLLAI
KEGGMLEDGSILFGFAFVDCAALKFWVGTVRDDASYAALGALLMQVSPKEIIFEGQGLSK
DAQRALKKLNLTGSNSFQLNASDTFRDAFEIRSIIDANKYFIGSSDSWNRVLDGVVHCDL
PLCALGGLISHLSRLMLNDVIRNGDIFSYEVYKGFLRMDGQTLVNLEIFNNNADGSQSGT
LYKYLDNCMTSSGKRLLKNWICHPLQDVDKINKRLDVVENMMANSEVVSHIAQLLRKLPD
VERLLGRVKSSFQSSSVLSLPLLGSKLLKQRLKAFGSLVRGLRIGIEMLMLLQKDEVMTA
SLSKVVPVPVLSGNKGLDEYLSQFEAAIDSEFPNYQDHNVTDSEAETLTILIELFVEKAA
RWSQMIHAINCIDVLRSFAMSAISSCGAMCRPKVLPHSNIANSFMETRSPILHMKGLWHP
YALGENGGPPVPNDILLGENGSSCTPGTLLLTGPNMGGKSTLLRATCLAVVLAQLGCYVP
CETCTLSVVDIIFTRLGATDRIMTGESTFLIECTETASVLQNATQNSVVILDELGRGTST
FDGYAIAYAVFRHLVESVNCRLLFATHYHPLTKEFAAHPRVKLQHMACCFDQASNTSSEV
DQKLIFLYRLASGACPQSYGMQIAAMAGIPNSVIQAASNAGQVMKEIVGESFKSSEQREN
FSTLHEDWLKSILSISKTKETDFDDDAYDSLFCLWHELKSSFKKIR
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcagaaatccatactctccttcctcaagaaaccagaggcctccgccggaggc
aaacccaccgttgccgacggagaaatcagaggaaccgacactccacccgagaaggtgccc
cgtcggatattttcggacagccggccttctctcttctccagcattaagcacaagttcgca
aaagttgacaattccacaaactcttcatctaacaccaggtgtgatggggatgaaaatttt
actattcggtctcttccccttaggtttgatgcatcagaggatttaggcaatggatatttg
gtctccaagcaacccagtgaccagcatgtgttaagttccagcagaacagtgtgtcctgaa
gggggcaaaggttctttgtttctaaaaactttggaggatgacgttcttggcccagagaca
ccaggcatgagaccacttgtccctaggttaaagcgagtgcaagaggatatctataatctt
gaggagaaagctgatttttctttgcaagataataggaaaagaatgaaacttgagcaggct
tctgatgtttcaaagaaaattcatgatgaggactgtgatacagttagcaagtttgaatgg
ttacataaatcccgaatcaaggatgccaatggaagaaagccaatggatcctctttatgat
aagaggacactttacatccctcctgaggcattgggaaagatgtcagcatctcaaaagcaa
tattgggatgtcaaacgccagtatatggatgtgattctcttctttaaagtgggaaagttc
tatgagctttatgaactagatgctgaaattggtcataaggaacttgattggaaaataaca
caaagtggtgtggggaagtgtcgacaggttggtgtatctgagagtggaattgacgatgct
gctcagaagttgatagctcgtgggtacaaggttggtcgaatagaacagttggagacatca
gagcaggcgaaatccaggggctctacatctgtcattagaagaaagttggttcatgtacaa
actcctgcaactactactgagggcaatattggacctgatgcagttcatcttcttgctata
aaggagggcggcatgctggaagatggttccattctttttgggtttgcattcgttgattgt
gctgcattgaaattttgggttggtactgtcagggatgatgcttcttatgcagcattgggg
gctttgttaatgcaggtgtctccgaaggaaattatttttgaaggacaagggctgtctaaa
gatgctcaaagagctctcaaaaagttaaatttgacaggatcaaattcattccaattgaat
gcaagtgacacttttcgtgatgcatttgaaattagaagtattattgatgcgaataagtac
ttcattgggtcttctgattcatggaaccgagttctcgatggagttgtgcactgtgatctt
cctttgtgtgcactaggggggcttattagtcatctatcaagattgatgttaaatgatgtc
atccgcaatggagatattttttcttacgaagtttataagggtttccttagaatggatggt
cagactctggtaaatttggagatctttaataataatgctgatggtagccaatcaggcact
ctgtacaagtatcttgataattgcatgacttcatctgggaagcggctcttaaagaactgg
atatgtcatccccttcaagatgtagataaaataaacaaaaggcttgatgtggttgagaac
atgatggcaaattcagaagttgtgtcacacattgcccaattgcttcgcaagcttccagat
gtggaaaggttgcttggacgcgtaaagtccagctttcaatcttcttctgtgctttcattg
cccttacttggcagcaagttactgaaacagcgactaaaagcttttggatctcttgtacga
ggactgcgaatcggaatagaaatgctaatgcttttgcaaaaggatgaagtcatgactgct
tcattatcaaaagttgtacctgttcctgtgctaagtggcaacaaggggcttgatgaatac
ctttctcaatttgaagcagcaatagatagcgagttccctaattaccaggatcataacgtg
acagactcggaggctgaaacattaactattttaatcgagttatttgtcgagaaggcggct
cggtggtctcaaatgatacatgccataaactgcattgatgtattaagatcctttgctatg
tctgcgatttcctcttgtggagcgatgtgccgacctaaagttttgcctcactccaacatt
gctaactctttcatggagacacgaagccccatacttcatatgaaagggctatggcatcct
tatgcccttggtgagaatggggggccacctgtgcccaatgatattcttctcggagaaaat
ggtagtagttgtactccagggacattgttattgaccgggccaaatatgggtgggaagtca
acactcttgcgtgcaacttgtctggctgttgttctggcgcagctaggttgttatgtgcct
tgtgaaacatgcactctatcagttgtagacatcatatttactcggcttggtgcaacagat
cgaatcatgactggcgagagtacattcctaattgagtgcacagagacagcatcagttttg
caaaatgctactcagaattcagtcgttattcttgacgaattgggtcgagggactagtact
ttcgatggatatgctatagcttatgctgtgtttcgtcatcttgttgagtcagtcaactgc
cggttgttgtttgctacgcattatcaccctctgacgaaggagtttgcagcccatcctcgc
gtaaaactgcaacatatggcatgctgttttgatcaggcttctaacacatcatcagaagtt
gaccaaaagctgatttttctgtatcgactagcctctggagcatgcccgcagagttatgga
atgcagatagcagcgatggctggaattccaaactcagtgattcaagcagcctcaaatgct
ggacaagtcatgaaagaaattgtgggggaaagcttcaagtcaagtgagcagagggagaat
ttctcaactttgcatgaggactggctgaaatcaattctatctatttcgaagacaaaggaa
actgattttgacgatgatgcgtatgattccttattttgcctgtggcatgagctgaaaagt
tctttcaagaagattaggtga
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