Salvia miltiorrhiza (redroot sage): 130988757
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Entry
130988757 CDS
T09291
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
130988757
03036 Chromosome and associated proteins [BR:
smil03036
]
130988757
Transcription factors [BR:
smil03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130988757
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130988757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
YL1
HMG_WDHD1
CDC45
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
130988757
NCBI-ProteinID:
XP_057768690
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Position
6:complement(13278375..13284320)
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AA seq
655 aa
AA seq
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MIVHYSSIPDSVSCMAELLFNSIALSGRAGTNAGQLKVHSGGIVWKKQGGGKTVEVDKSD
LIGLTWMKIPRTNQLGVRTKDGLYYKFTGFRDQDATGLTAFFQSNYGKTPEEKQFSVSGK
NWGEVDLNGNMLTFLVGAKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLME
ISFHIPNSNTQFVGDESCPPAQVFRDKIVSMADVGAGGEEAVITFDGIAILTPRGRYNIE
LHLSFLRLQGQANDFKIQYSSVVRVFWLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQF
ETDAVMDAALSMSEDLYNAKYKDKLELAHKGLGHEIFVAILRGLSGAKVTRPGKFRSSQD
GYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEVEYVEFERHTAGGSNMHYFDFLIR
LKTEQEHLFRNIQRNEYHKLFEFVQNKGLKLMNLPTTQATDGVADVLHHADDDAVDPHLE
RIKNEAISDEEDEDFVADKYDEGSPTDDSGEGESDASKSGDEKEAPTKKKPKKEPSLPKA
SSSKKKAKEGEDEGSKKKKQKKKKDPNAPKRAISAFMFFCQTERENLKKTHPGISFTEVG
KVLGERWNKMTGEEKCPYEAKARADKIRYSDEIADYRNPQTTNVDAPRTSNYFKH
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttcattactcctccattccagattcagtttcttgtatggcggagctcctcttc
aacagcatcgctctcagtggccgcgctggaactaatgcagggcaacttaaggtacattca
ggtggaatagtatggaaaaagcagggcggcgggaagacagtggaagttgataaaagtgat
ttgatagggcttacctggatgaagattcctcgaacaaatcaacttggagttcggacaaaa
gatggcctttattataagttcactggcttcagggaccaagatgctaccggcctgactgca
tttttccaatccaactatgggaaaacaccagaggagaagcagttttctgtcagtggaaaa
aactggggggaagttgatttaaatggaaatatgcttactttccttgtgggagctaaacaa
gcatttgaggtttccctagcagatgttgcacaaacccaacttcaaggaaaaaatgatgtc
atgttagagtttcatgtagatgacactactggggccaatgagaaagattctttaatggaa
ataagttttcacatcccgaattcgaacactcaatttgttggtgatgaaagctgccctcca
gctcaggtgttccgggacaagattgtttcaatggcagatgttggagcgggaggtgaagaa
gccgttattactttcgatggaattgctatactcactcctcgtgggcgatacaatattgaa
cttcatctctcctttttgcgcctacaaggacaagccaatgacttcaaaattcagtatagc
agtgttgttcgtgttttctggttgccaaagtctaaccagccgcatacctttgtggttgta
actctagacccaccaattcggaaggggcaaactttgtatccacatattgtgatgcagttt
gagacagatgctgtgatggatgcagccctgtcaatgagtgaagacctttataatgccaaa
tacaaggacaaactagagcttgcacataagggactcggacatgagatctttgtggcaatt
ctgcgtggtctgtcgggtgccaaggtgacaagaccagggaaattccgtagtagccaagat
ggttatgctgtgaagtcgtcccttaaagctgaagatggagttctttatcctcttgaaaaa
agcttcttcttcttacccaagccgcctacgctcattctccacgaggaggtggaatatgtg
gaatttgagaggcacactgctggaggttcaaatatgcattattttgattttctgattaga
cttaagaccgagcaggagcaccttttccgaaacattcagagaaatgagtaccataagctc
tttgaattcgtccaaaataaagggctgaagctgatgaatttgccaacaactcaggcaaca
gatggcgttgcagatgttcttcatcatgctgatgatgatgctgttgacccacatcttgag
aggataaaaaatgaagcaatcagtgatgaggaggacgaggactttgttgctgacaaatat
gatgaaggctccccaacagatgattctggggaaggggaatccgatgccagtaaaagtgga
gacgaaaaagaggcaccaaccaaaaagaaacccaaaaaagaaccttcccttcccaaggca
tcatcaagtaagaaaaaagctaaagagggtgaagacgagggatccaagaagaagaaacaa
aagaagaaaaaggatccaaatgcaccaaagagggcaatcagtgccttcatgttcttctgt
caaactgaaagagagaatctcaagaaaactcatcctggaatctcctttacagaagtgggc
aaagttctaggtgaaagatggaataaaatgacaggtgaggagaaatgtccgtatgaagct
aaagctcgagcagacaagatacgttatagcgatgagatcgctgactatagaaatccgcaa
accactaatgtagatgcccctcgcacctctaattacttcaaacattag
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