Salvia miltiorrhiza (redroot sage): 130988776
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Entry
130988776 CDS
T09291
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130988776
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130988776
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
DUF6600
Motif
Other DBs
NCBI-GeneID:
130988776
NCBI-ProteinID:
XP_057768717
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Position
6:13322471..13324540
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AA seq
445 aa
AA seq
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MQGMKMKSLMLLLAFACISRVVDAHIGEWDEVWLKRAQEARNRTLDTYEPIPEHVVAHLN
VNAKKSLDEIKNENVKSNSTRRHLQKGYTGPCMATNPIDRCWRCQPNWAKNRFRLADCVL
GFGYKTTGGKNGKIYVVTDPSDRELLNPRPGTLRHAVIQKEPLWIIFDRNMVITLQQELI
MQGDKTIDGRGVRVDIAYGAGITIQFVSNVIIHGLRVHDIVPKEGGMIRDSVDHYGLRTG
SDGDGISLFGAQNVWIDHVSMTNAADGLIDAIEGSTGVTVSNNHFTDHNETMLFGASESA
THDDKMQITVAFNHFGKRLVQRMPRCRFGYFHVVNNDYTHWKMYAVGGSSHPTIISQGNR
YIADHPFAKQVTHRERTPESEWRKWTWVSEGDQFLRGAYFIESGDKDWTKKHPQFYDKIM
AAPATKVAELTKFAGALGCKEGVPC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaatgaagatgaagtcattgatgttgttgttggcttttgcctgcatttcgcga
gttgtggatgctcatataggagaatgggacgaggtatggctgaaacgagcgcaggaggcc
aggaaccgtactcttgatacctacgagcccatccctgaacatgttgtcgcccacttgaac
gtcaacgcaaaaaagagcttagacgaaataaaaaatgaaaatgtgaagtcaaatagcact
cggaggcatctacagaagggttacaccggtccatgcatggcgaccaacccgatcgaccgg
tgctggagatgccagccgaattgggcgaaaaaccggttcaggctggcggactgcgtgctg
gggttcgggtacaagacgaccggcggcaagaacgggaagatatacgtggtgacggatcca
tcggaccgcgaacttctgaaccctaggccgggaaccctacgccacgcagtgatccaaaag
gagccgttgtggatcatatttgatcgcaacatggtgatcactctccagcaagaactcatc
atgcaaggcgacaagaccatcgacgggcgcggcgtcagagtcgacattgcctacggcgcc
ggaataaccatccagttcgtgagcaatgtgatcatccatggcttgagggtccatgacatt
gtccccaaggaaggcggcatgataagggactccgtcgaccactacggcctccgcacgggg
agcgacggcgacgggatatcgctcttcggggcccaaaacgtatggatcgatcacgtctcc
atgaccaacgccgccgatggcctcatcgatgccatcgagggctctaccggggtcaccgtc
tctaacaaccacttcaccgatcacaacgagacgatgttgtttggtgcatcggagagtgct
actcacgacgacaaaatgcaaatcacggttgcattcaatcactttgggaagagattggtg
cagaggatgccgcgctgcagatttggatacttccatgttgtgaacaacgactacacgcac
tggaaaatgtatgccgttggtgggagcagccatccgactatcattagccagggcaacaga
tacattgctgatcacccttttgctaagcaggttacacacagagagaggactccagaatca
gaatggagaaagtggacatgggtatcggagggagaccaatttctgagaggggcatatttt
attgagtcgggtgataaagattggacgaagaagcatcctcaattctacgacaagattatg
gctgctccggcaacaaaagtagcagaattgactaaatttgcaggtgcacttggttgcaag
gaaggagtaccatgttaa
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