Salvia miltiorrhiza (redroot sage): 130988909
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Entry
130988909 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130988909
KO
K11790
denticleless
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130988909
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130988909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_LRRK2
TAF1C_beta-prop
VPS8_N
Motif
Other DBs
NCBI-GeneID:
130988909
NCBI-ProteinID:
XP_057768878
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All DBs
Position
6:23451769..23455431
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AA seq
514 aa
AA seq
DB search
METSISRSFFQDLKLREVNGFRVKKRPYTGNDSRGFDPIGAVAIEHGSEPSPPMALSFCK
TSRNAHILALADEAGYVTLTDTRKKLLDNASYQENAEKAKVTEWIAHENAVFDICWIKDD
ANMLTASGDQSIKIWDTQERKCIRALMGHTGSIKSISCHPSNQELVVSGSRDGSFVVWDT
RCSKSVHKSCVQPLSIVHEAHTSSGRRRCRRGKAESMSITSVLYLKDEVSIATAGAVDSI
IKFWDTRHLKGPVTQAYPNSESSTEEKRLHGISSLSQDLNGMFVTASCMDHRIYLYNVLQ
LEKGPIKTFSGGRTESFFVKSAISPDAAHVLSGSSDGNAYIWQVDKPQMDPIILKSHDGE
VTAVNWCPSEMGKVATCSDDFTVRLWNIQSSCYSNMRSPSSLRKRVRALPRMERRKLFLD
EPMPSSSKSNEESSVSNVVCDANSHTPITMPEVSTPESHKKKLSLSFEGKQDLVRTPEAE
SRSPSSVLNPPSSLKRKTIRDYFPVPDNKVSTVQ
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccatatctcgatcatttttccaagacttgaagctaagagaagtcaatgga
ttccgagtaaaaaagcggccttatacgggcaacgattcgcgaggttttgacccaatcgga
gctgtagcgatcgagcacggctctgagccttcgcctccaatggctctgtctttctgcaag
accagcagaaatgcccatattcttgccctcgcggatgaagcggggtatgtcacattgact
gatacgaggaagaaattattggataatgcttcataccaagaaaatgcagagaaagctaag
gtgactgagtggatagctcacgaaaatgccgtatttgatatatgctggatcaaggatgac
gcaaatatgttaactgcttcaggagatcaaagtattaagatttgggatacacaagaacgc
aagtgcataagagcattgatgggacacactggaagtattaaatcaatcagctgccaccct
agtaatcaggagttagttgtctctggttcaagagatggatcatttgttgtatgggatacc
agatgctccaaaagtgtccacaagtcgtgtgtacagcctttatctatagtacatgaagca
catacttcttcaggtcgaagacgttgcaggcgtggaaaggctgaatccatgagcatcaca
tcagtgctttatctcaaagatgaagtttctattgcgactgctggagcagttgacagtatt
attaagttctgggacacacggcatctcaaaggtccagttactcaagcatatcctaactca
gaatcatcaactgaggaaaagagattgcatggcatatctagtctgtctcaagatttgaat
ggcatgtttgtcactgcctcatgcatggatcacaggatatacctgtataatgtgcttcag
cttgagaaggggccaataaaaactttttctggaggccgaactgagtcattctttgtgaag
tcggcaatcagccctgatgcagctcatgtactcagcggttctagtgatgggaatgcctac
atatggcaggtggacaaaccccagatggatcctatcattttgaaaagccatgatggagaa
gtcacagcagtaaattggtgtccatcagagatggggaaagtggcaacttgctcagatgat
ttcacagttcgcctttggaacatccaaagcagttgctattcaaacatgagatctccttca
tcactaagaaagagagtgagggctctaccaagaatggagaggcgaaaactgttcttggat
gagccaatgccatcaagctcaaaaagcaatgaagaaagcagtgtttctaatgtagtatgt
gatgccaactcccatactcccataacaatgccagaagtgagcacaccggaatcccataag
aaaaagctgtcgttgagttttgaagggaaacaggatttagtgagaactccagaagctgaa
agcagaagcccttcttctgttctaaaccctccttcctcattgaaaaggaagactatccga
gactattttccagttcccgataacaaagtctctactgttcagtag
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