Salvia miltiorrhiza (redroot sage): 130989306
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Entry
130989306 CDS
T09291
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
smil03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130989306
03083 Polycomb repressive complex
130989306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
130989306
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
130989306
Histone modification proteins
HAT complexes
HATB complex
130989306
HDAC complexes
Sin3A-HDAC complex
130989306
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130989306
PRC2.2
130989306
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
130989306
Heterochromatin formation proteins
Other heterochromatin formation proteins
130989306
Chromatin remodeling factors
NuRD complex
130989306
NuRF complex
130989306
NuRF complex (fruit fly)
130989306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_EML
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_RFWD3
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
130989306
NCBI-ProteinID:
XP_057769248
LinkDB
All DBs
Position
6:35986758..35989568
Genome browser
AA seq
392 aa
AA seq
DB search
MEEVVMVEEEFSVWKKNTPLLYDLVICHSLEWPSLTVQWLPVPPSSDGGDLAAHKLIIGT
HTSDDYPNFLMLADAYLPRDPTSAIEVDAENSIVPRVDIVQKIRVDGEVNRSRCMLQNPA
LIAAKTNIPEVFVFDTAKQLEDANVDSCNPDLRLRGHDKEGYGLSWSSFKEGYLLSGSND
CKICLWDVSAMPQEKVLDAKFTYEGHENVVEDVSWHLKNENLFGSVGDDCKLVIWDLRTN
KFQQSVVVHEKEVNYLSFNPFNEWVLATASSDSTVGLFDMRNLGAPLHVLSSHEKEVFQV
EWDPNHETILASSADDRRLMVWDLNRIGDEQLEGEAEDGPAELLFSHGGHKAKISDFSWN
KNQPWVISSVAEDNTLQVWQMAESIHPDDDFS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtggtgatggtggaggaggagttttcggtgtggaagaagaacacgcccttg
ctgtacgacctcgtcatctgccactcccttgaatggccgtcgcttaccgtccagtggctt
ccggtaccgccttcatccgacggcggcgatctcgccgcgcacaaattgataatcgggacg
catacatccgatgattaccccaattttctcatgctcgccgacgcgtacctcccacgggac
cccacctccgccatcgaagtcgacgccgagaactccatcgttcctagggtagatatagtt
caaaaaattcgagttgatggagaagtgaataggtcgcggtgtatgttacaaaaccctgct
ttaatcgctgcgaagaccaatattcccgaagtattcgtgtttgatactgctaagcagctg
gaggatgctaatgttgattcttgtaatccagacttgaggctacgaggccacgacaaagaa
ggatatggtttgtcgtggagctcgtttaaagaaggatatctattgagtggttcgaatgat
tgtaaaatttgtttgtgggacgtctctgcaatgcctcaagagaaagttcttgatgcaaag
tttacttatgagggccatgagaatgtggtggaggacgtgtcgtggcatttaaagaatgag
aacttgttcggctctgtgggagatgactgcaaactagtgatttgggacttgcgcacgaac
aagttccagcagtcggttgttgtacatgagaaagaggtgaattatttatcttttaatcca
tttaatgagtgggttttagctactgcatcctctgattctaccgtcggtctgtttgatatg
cggaacttgggtgctcctctgcatgttttaagcagtcatgaaaaagaggtattccaggtt
gaatgggatcctaaccacgaaacgattcttgcatcttctgctgatgacagaaggttgatg
gtttgggaccttaacaggattggagacgagcaactagaaggcgaagctgaagatggcccc
gccgagctcctcttctcccatggtggccataaagctaagatttcagacttttcatggaac
aagaatcaaccatgggtcatctcgagcgtggcagaggacaacacactacaggtttggcaa
atggcagagagcatccatcccgacgacgatttttcgtag
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