Salvia miltiorrhiza (redroot sage): 130989384
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Entry
130989384 CDS
T09291
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130989384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130989384
03009 Ribosome biogenesis [BR:
smil03009
]
130989384
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130989384
Spliceosome [BR:
smil03041
]
Complex A
U1 snRNP components
U1 related factors
130989384
Complex B
130989384
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
130989384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
130989384
NCBI-ProteinID:
XP_057769331
LinkDB
All DBs
Position
6:complement(37100605..37105933)
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AA seq
690 aa
AA seq
DB search
MAAAAAGISYAPEDPALPKPWKGLVDDKTGYVYYWNPETNITQYDKPVAPGHTSYAPVHK
SLSSSVQKSPQGRYNANDNNDRYSTASNGSAKASVPVTYQATRGRSDYSQSDVEVKASVG
YGPHPSNGADSIVSAEAYRRRHEISVTGDNVPQPFTSFEATGFAPEILREVQHAGFSAPT
PIQAQSWPIAIKGRDIVAIAKTGSGKTLGYLIPGFIHLKQRRNNPKLGPTVLVLSPTREL
ATQIQEEAVKFGRSSKISCTCLYGGAPKGPQLKDIDRGVDVVVATPGRLNDILEMRRISL
HQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRRIAAELLVNPVQ
VNIGNVDELVANKAITQYIEVLSPMDKRRRLEQILRSQEPGSKIIIFCSTKKMCDQLAGN
LTRQFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVLNYDFPTG
VEDYVHRIGRTGRAGATGVAYTFFCEQDAKHASELIKLLEGASQRVPSELRDMASRGGGM
GRARRQWGSGPGGRDGGRGGGRFGSSQSGRDGGRGGWGMPSSPDRAGGRGYDREPRDRHV
SGFSNGYETNGTGSFHALTAPKSRGRSRSRSRSPRKISGWGEKPRSRSRSMERFPSKSAR
SSSYGSKDYKSSSHYEKSHSSPNVNRTLPV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgcagctggtattagttatgcacctgaggaccctgcgctcccaaaacca
tggaagggtctggttgatgataagactggatatgtttactattggaaccctgagaccaat
ataactcaatacgacaaacctgttgcccctggtcacacaagctatgcgccagttcataaa
tctttgagttcatcggttcagaagtccccccaaggacgatataatgcgaatgataataat
gacagatattccacagctagcaatggatcagcaaaggcttctgtaccggtaacttatcag
gccaccagaggaagatcagattattcacagagtgatgtcgaggtgaaagcgagtgttgga
tatggacctcatccttccaatggtgcagacagtattgtgtctgctgaagcctatcgccgg
cgtcatgaaatttctgtgactggagacaatgttcctcaaccattcacctcatttgaagcc
actgggtttgctcctgagattcttagggaggtgcagcatgctggtttttctgctcctact
ccaatacaggcacagtcatggcctattgctattaaaggtcgtgatatagtagcaattgcc
aagacaggctccgggaagaccttgggttacctgattcctggatttattcatctgaaacaa
aggcgtaataacccaaaattaggtccgacagttttggtgttgtcaccaactagagagttg
gctacacagatacaagaagaagctgttaagtttggaaggtcatccaagatatcttgcacg
tgtttgtatggaggtgcacctaagggtccgcaactgaaagacatagacagaggtgttgat
gtggtggtggctactcctggtcgattgaatgacattctggagatgagaaggattagtctc
catcaggtctcatatttggttttagatgaggcagacaggatgctggacatgggttttgaa
cctcagataagaaagattgtgaaggaggtcccggctcgtagacaaaccctgatgtacaca
gcaacatggccaaaggaggtgcgcagaattgctgctgaattactagttaaccctgttcag
gttaatattggaaatgttgatgagctcgttgccaacaaggcaattactcagtatattgaa
gttttgtcaccaatggacaagcgcaggcgcttggaacagatattgagatctcaagaacct
ggatcaaagataataattttctgctctaccaaaaaaatgtgtgaccaactggcaggcaac
ctgacccggcaatttggagcagctgctattcatggagataaatcccagggtgagagggat
tatgtgttgaatcagtttcgcactggaagatccccagtgcttgtggccactgatgttgcc
gcccggggtctggacattaaggatataagggtggttttaaactatgacttccctactgga
gtagaggactatgttcacagaattggaagaactggccgggccggtgccactggcgtggca
tatactttcttttgtgagcaggatgcaaagcatgcttcagagcttatcaaactcttggaa
ggtgctagtcagcgtgtgcccagcgaactccgtgacatggcttcacgtggtggtggaatg
gggagagcaagacgtcagtggggctcaggccctggcggacgtgatggaggtcgtggtggc
gggcgtttcggttcttctcaaagtggacgggatggggggagaggtggttggggaatgcca
tcgtctccagatagggccggtggccgtggatatgatcgcgagccgcgtgatagacatgtc
tctggattctctaacggatacgagacaaatggcactggaagcttccatgcattgactgct
ccaaagagtagaggcagaagtcgcagtcgtagcagaagccccagaaagatttcaggatgg
ggtgaaaagccccgaagtcgtagccgtagcatggagagattcccatccaagagcgcacga
tcctcttcttatggcagcaaggattataaaagctcgagtcattatgagaaatcacattcc
tctcctaatgttaacaggactctacccgtctag
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