Salvia miltiorrhiza (redroot sage): 130989615
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Entry
130989615 CDS
T09291
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
130989615
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130989615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
zf-RING_2
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
130989615
NCBI-ProteinID:
XP_057769611
LinkDB
All DBs
Position
6:41979835..41996589
Genome browser
AA seq
1789 aa
AA seq
DB search
MSNPGGCDDFEGRHRGISLSNTVHSEVAPCLPLPSLPVFCGGRDQELRLFDSRGGAARWN
SSGADVSGRIADLLRNADVSYLNLKNEENHQPDGSVGNLNLTNDVLRHEAEAFEYVSPGP
GMESMYRGNLTESKSFEQSMPAVNQVPTDSLGTKNYQQDHHANNDIINSSRKPKVKRKAK
VDIPSAPGPDSREGQDAAVEGFCERLEDICNRAEIPSDDREETEWVPLTQSDLKALVNEI
MSIRSKSLLHIVPVDTLSRMLKVLDHQIHRAEGLSIDDCEKLDAEVVSSLYCALESIHAA
LAIMAHDGMPKQIYKEEYIERILEFSRHQILDVMFACDPAYRALHKPNYNVALDDEEDDE
VEDFGSTSKKRRTSKSVRVRKSTTNRMSGTVNIILQKLCTIVSFLKQLLLIERLSDSCIL
QLVRTSLQTLLVDNIQLLQLKAISLIGGIYYMYTQHRAYMMDETIQILLKLPLSKRVPRT
YHLPDEEQRQIQLVTALLIQMIHHCANLPEFVRLAPGSPSLDVSIDTDYPSKCHEAVTES
CCLFWSRILQRYTSTKNQDASELKSMMENLVMDLLTTLNLPEYPASAPILEVLCVLLLQN
AGLKSKDIAARTMAIDLLGTIAARLKHDAVVCRKEKFWIVQVLMNSENSDPNYLRDVCAI
CLDSTAERSSIECQGCHRPFHFDCIGGREQDLSSRTFDCQVCLCEKQLLVLKTHCESESK
DDQKQNRVSKKSSRASFSVTKEEIIQQMLLSYLQDAGSADELHLFMRWFYLCLWYKDDPA
SPQKFLYFLARMKSRAILRDSFSFSSFLTRDSVKKVTLALGQNNSFARGFDKILQVLLAS
LRENSPVIRAKAMRAVSIIVEADPEVLGDRLVQTAVEGRFCDSAISVREAALELVGKHIA
SHPDVGLKYFEKVAERIKDTGVSVRKRAIKIIKDMCTSFTDFSQSTTAFVEIISRINDEE
SSIQDLVCKTFYEFWFEEPSGLQSRTFKDGSSVPLEVTKKTEQVVETLRRMSSHQPLAIV
IKRILALDFFPQSAKAAGINPVLLASVRRRCELMCKCLLENVLRVAETNSEEGEGRMLPY
ILLLHSFCLVDPTLCAPASDPSQFIITLQPYLKSQSDNRVAAQMLESILFIIDSVLPLLR
KLPETVVEELEQDLKQMIVRHSFLTVVHACIKCLCSAGKVSGKGASVVEYLIQLFYKRLD
ALGFDNKQQVGRSLFCLGLLIRYGSPLLDASASNPRNMDVASSIDLFKKYLQAEDFIIKV
RALQALGYVFIARPECMLQKDVSKILEATLSTSADVRLKMQSLQNMYEYLLDAESRMEPD
KASNDNNNQSADGTSVPVAAGAGDTNICGGIVQLHWDSILGRSLDANEHVRQAALKIVEI
VLRQGLVHPITCVPYLIALETDPEEVNAKLSHHLLMNMNEKYPAFCESRLGDGLQLSFIF
IRTMSGDLPEVSNKSQAKLFSNIKGKVDVGSSTFARHGVARIYKLIRGNRISRNRFMSSI
VHKFETPTCSDSVIPFLMYCVEILALLPFTLPDEPLYLIYTINRVVQVRSGTLESNIKDF
LNLLQGNVHKSNGNGMAQVDSTISPGSERNMAIDGNQTLQGELPNQHLYGEDSYTDPNTN
PMPSRDPYTISASDFQKIQSDFLAAGALQLLLKLKRHLKIVYSLDDIRCQAFSPNEPVKP
GESLVRQSIPFNISDVNIDPPNTYEDVVQRYQEFKNALREDTIDYSTYTANIKRKRPPST
RRGKAIRMADMDDDDDGDDDEDWGNGVSRLNKSAGRRGSYTRTRQRQQL
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggcggctgtgacgacttcgaggggcgccataggggcataagcctctcg
aacacagttcactcggaggtggcgccgtgcctgccgctgccgtcgctccccgtgttctgc
ggcgggcgcgatcaggaacttcgcctcttcgacagccgcggtggcgctgcaaggtggaat
tctagcggcgcggatgtctcgggcaggatagctgatctcctccgcaatgctgatgtgtct
tacttgaatcttaaaaatgaagaaaaccatcaaccagatggttcagtggggaacttaaat
ctaaccaatgatgttttgagacatgaggcggaagcatttgaatatgtctctccaggtcct
ggtatggagtcaatgtatagaggtaatttgaccgaatcaaagtcctttgagcagagcatg
cctgccgttaatcaagtgccaactgactcattaggtacaaaaaattatcagcaagaccat
catgctaataatgatattattaactcttcccgaaaaccaaaagtaaaaagaaaagcaaaa
gttgacataccatcagctcctggtcctgattcccgtgagggtcaagatgcagctgttgag
ggcttttgtgaaaggttggaggacatatgtaacagagcggaaattccttctgacgacaga
gaagaaacagaatgggtaccattgacccaatctgatcttaaggcactagtcaatgaaatc
atgtcaattcgatccaagagtttactccatatagttccagttgatactctttcaaggatg
ttaaaagttttagatcaccagattcatcgagcagaaggactttcaatagatgattgtgaa
aagttggatgctgaggtggtatcatccctttattgtgctctggagtccattcatgcagct
ttggctattatggctcatgatggaatgcctaaacagatttacaaggaagagtatattgaa
aggatcttggaattttcaagacatcaaattttggatgttatgtttgcttgtgatcctgca
tatcgggctctacacaaaccaaattataatgtggcacttgatgatgaggaggatgatgaa
gttgaggattttggttcaaccagtaagaagaggcgaacttctaagagtgttagagttagg
aaatcaacaacaaaccggatgtctggtacagtaaacattattcttcagaagttgtgcacc
attgtcagttttcttaagcagttgttgttgatagaacgcttatcagatagttgcattcta
caacttgtgagaactagtttacagactcttttggtggataatatccagcttttgcagctg
aaagcaatcagtttaattggtgggatttattatatgtacactcagcatcgtgcgtatatg
atggatgaaactattcaaatacttctaaagctgccactttctaagagagtaccaagaact
tatcatcttccagatgaagaacaaaggcagattcagttagtcactgctctattgattcaa
atgattcatcattgtgcaaatcttcctgaattcgtgaggctagcccctggaagtccttca
ctggacgtttctattgatactgactacccttccaaatgtcatgaggccgttacagagtct
tgctgcctcttttggagtcgaattcttcagcggtatacaagcacaaaaaatcaggatgca
tctgaattgaagtcaatgatggaaaatcttgtgatggatttgctcactactctgaactta
ccggagtatccagcctcggctcctattctagaggttctgtgtgtattactacttcagaat
gctgggttgaaatcaaaagatattgctgccagaacaatggccattgaccttcttggtaca
attgctgcaaggttaaaacatgatgcagtggtgtgtaggaaggaaaagttttggattgta
caggtcttgatgaatagtgaaaatagtgaccctaactatctgagagatgtctgtgctatt
tgtttggattcaactgccgaaaggtctagtatcgaatgtcaaggctgtcataggccattc
cattttgattgtattggcggaagagagcaggatctttcttctcgtaccttcgattgtcag
gtttgcttatgcgagaaacagcttcttgtattgaaaacgcattgcgagtccgaatccaag
gatgaccagaaacaaaatcgtgtttcaaaaaaatcttccagagcttcattctcagtaaca
aaagaggagatcattcaacaaatgctcctaagttatttgcaggatgcagggtctgcagat
gaactgcatctctttatgcgatggttttatctttgcctttggtataaagatgatcctgct
tctcctcaaaagttcctctactttcttgcgaggatgaaatcaagagcaattctgcgagac
tcattttctttttcatctttcctgacgagggattcagtgaaaaaagttactctagcattg
ggacaaaataattcttttgctagaggatttgacaagatacttcaagtgctattggccagc
ctgagggagaactcaccagtgattcgtgctaaggcaatgcgagcagttagtatcatcgtt
gaagcagatcctgaggttttgggtgacaggcttgtgcaaacagcagttgaagggaggttt
tgtgactctgctatatcagtaagagaagcagcactcgagcttgttggaaagcacattgca
tcgcatcctgatgttggtctaaagtattttgagaaggtagcagagaggattaaggatact
ggagtaagtgtccgaaaacgagccattaaaattatcaaggatatgtgtacctccttcact
gacttttcacagagcaccactgcttttgtggagataatttcccgtatcaatgatgaagaa
tccagcatacaggatctggtctgcaagacattttatgagttttggtttgaggagccttct
ggtttgcaaagccgtacttttaaagatggtagttctgttcctctggaagtgactaagaag
acagaacaggtcgttgaaactttgagaaggatgtccagtcaccaaccacttgctattgtc
attaaaagaatcttagcccttgatttctttccccaatctgctaaagctgctgggataaac
cctgtattacttgcatctgtacgcaggcgatgtgagctaatgtgcaagtgtctgctggaa
aacgtattgcgggttgctgagacaaacagtgaggaaggagagggccgtatgcttccatat
attcttctactgcattcattttgtctggtggatcctacattatgtgcaccagcctctgat
ccttctcagtttattatcacactgcagccttatttgaagagtcagtctgacaatcgagtg
gcggctcagatgctggagagcatattgtttataattgattctgtcttgccattattgcgg
aagcttcctgaaactgttgtggaggaacttgaacaagacctcaaacaaatgatagtccga
cattctttcttgacagttgtacacgcttgcataaaatgtttatgctctgcggggaaagta
tcagggaaaggtgcaagtgttgttgagtatcttatccagttgttttacaaacgcctggat
gccttggggtttgataacaagcagcaagtaggtaggtccctgttttgtcttgggttgttg
attcgctatggtagtccattactggatgcctctgcttccaacccaagaaacatggatgta
gcaagtagtatcgacttattcaaaaagtatctccaggctgaggacttcattattaaagtc
cgggcactacaggctttaggctatgttttcattgctcgtcctgaatgtatgttgcaaaag
gatgtcagtaaaattttggaggcaactctttccaccagtgctgatgttcgtctgaagatg
caatcattacagaacatgtacgagtaccttctggatgcggaaagccggatggagccagat
aaagctagtaatgataataataatcaatcagcggatggtaccagtgttcctgttgctgcc
ggagctggtgatactaacatttgcggcggtatagttcagctacattgggatagcatctta
ggaagaagtctggatgcaaacgaacatgtccgtcaagctgctcttaagattgttgaaatt
gtgttgcgccaaggtcttgtacatcctattacttgtgttccgtatctcattgcccttgaa
acagatccagaggaagttaatgcaaagttgtctcatcatctcttgatgaatatgaatgag
aagtatccagctttctgtgaaagccgtcttggtgatggccttcagttgtcatttattttc
attcgtaccatgagcggagatctccctgaagtgtcaaataagtcccaggccaaattattt
agcaatattaagggaaaggtagatgtggggtcttcaacatttgcgcggcatggtgtggct
cgaatctataagctcattcgtgggaatcgtatttcaagaaacagattcatgtcgtctatt
gtacacaaatttgaaacaccgacctgcagtgattctgtgataccatttctaatgtattgc
gttgagattcttgctttgctacctttcacgttacctgatgagcctctttatttgatctat
actataaaccgagtggtacaagttaggtctgggacattagaatcaaacattaaggacttt
ttgaatttattacaaggaaatgttcataaaagcaatgggaatggaatggcccaagtcgat
agcactataagccctggtagtgaaagaaacatggcaattgatggtaaccagacactacag
ggtgagttaccgaatcaacatttatatggggaagattcatatacagatccaaacacgaat
cccatgccctcgagagatccttataccatctctgcaagtgactttcagaaaattcagtcc
gactttctagcagctggtgcgctgcaacttcttctaaagctcaagaggcacctgaagatt
gtttacagcctagatgacatccgatgccaggcattttctccaaatgaaccggtcaaacca
ggcgaaagtttagtacgacagagtattccattcaatatcagcgatgtcaacattgaccct
cccaacacctacgaagatgtcgttcagagatatcaggagttcaagaatgctttaagggaa
gacacaattgactattcaacctacacagccaacatcaagaggaaacggccgccctccacg
agacgagggaaggctatccgaatggcagatatggatgatgatgatgatggggatgatgat
gaagattggggtaacggtgtatccaggttgaacaagagtgccggtaggagaggtagttac
acgagaacgaggcagcggcaacagctgtaa
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integrated database retrieval system
