KEGG   Salvia miltiorrhiza (redroot sage): 130989989
Entry
130989989         CDS       T09291                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03082  ATP-dependent chromatin remodeling
smil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    130989989
   03083 Polycomb repressive complex
    130989989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smil03036]
    130989989
Enzymes [BR:smil01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     130989989
Chromosome and associated proteins [BR:smil03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     130989989
   HDAC complexes
    Sin3A-HDAC complex
     130989989
    BRAF-HDAC complex
     130989989
    REST complex
     130989989
    SHIP complex
     130989989
    MiDAC complex
     130989989
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     130989989
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    130989989
  Chromatin remodeling factors
   NuRD complex
    130989989
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 130989989
NCBI-ProteinID: XP_057770156
LinkDB
Position
6:complement(45361222..45366227)
AA seq 499 aa
MDTGGNSLPSGADGSKRKVCYFYDPEVGNYYYGQGHPMKPHRMRMTHALLAHYGLLQNMH
VLKPNPARDKDLCRFHADDYVSFLRRITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSIGGAVKLNHGHCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKTHERVLY
VDIDIHHGDGVEEAFYITDRVMTVSFHKFGDYFPGTGDIRDIGFGKGKYYALNVPLDDGI
DDESYQSLFKPIISKVMEVYRPGAVVLQCGADSLSGDRLGCFNLSVKGHAECVRFMRSFD
VPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPQHEYIEYFGPDYTLHVAPSNMEN
KNCRDMLEEIRAELLKNLSRLQHAPSVQFQERPPDIELPEVDEDEENKDERKRPDSNVNI
DYERNSTPSRVKMEFVEPMANDKNDEAVDELARKIDSTLAPTSSKGSMAAAEVDGMQYVK
LEKENTKTLLDELAQMDQH
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggatactggaggtaactctttaccgtctggagcagacgggtcgaaaagaaaagtgtgc
tatttctacgaccctgaggttggaaattactattacggccaaggtcatccgatgaagccc
catagaatgcgcatgactcatgctcttctcgcacattacgggttgctgcaaaacatgcat
gtcttgaagccaaaccctgctcgagataaggatctttgcaggtttcacgcagatgattac
gtctctttcttgagaagaatcaccccggagacgcaacaagatcagttgaggcagctgaag
agattcaatgttggggaggactgccctgtttttgacggcctttattccttctgtcagacc
tacgctggaggctccatcggtggtgctgtgaagttaaatcacggacattgtgacattgcc
ataaattgggccggtgggctgcaccacgccaaaaaatgcgaggcttctggtttctgctat
gtcaatgatatagtgctggccattttggaactccttaaaacgcatgagcgtgtcttatac
gtggacatcgacattcatcatggtgatggagttgaagaggctttctatataactgacaga
gtcatgactgtttccttccacaaatttggagattatttccctggtactggggacatacga
gatattggattcggaaaggggaaatattacgcgcttaatgtcccgttagacgatggaatc
gatgacgaaagctatcaatccttattcaagccaattattagtaaggtaatggaggtttat
aggcctggagcagtggtcttacaatgcggggctgattccctatccggggataggttaggc
tgctttaacctctcagttaaaggtcatgcagagtgtgtcaggtttatgagatctttcgat
gtaccccttcttttactcggtggaggtggctacacgatacgcaatgtcgctcgttgctgg
tgttacgagacaggagtggcgcttgggattgaggtcgacgataagatgccacagcacgaa
tatatagagtattttggcccagactacactcttcatgttgctccgagtaacatggaaaac
aaaaactgtcgggacatgctcgaagaaataagagcagagcttctaaaaaatctgtcaaga
cttcagcatgctccaagtgttcagtttcaggagcggccacccgacattgaactacctgag
gttgacgaagacgaagaaaataaggatgaacggaaacgccctgattcgaacgttaacatt
gattatgaaaggaattctacgcctagcagggtgaagatggaatttgttgaacctatggca
aacgacaagaacgacgaggccgtggatgaacttgctcgaaagatagattcaacacttgcg
cctacaagctcaaagggctcaatggcagctgcagaagtagatggcatgcaatatgttaag
ctcgagaaggagaacacgaaaaccctactcgatgagcttgcccagatggatcagcattga

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