Salvia miltiorrhiza (redroot sage): 130990097
Help
Entry
130990097 CDS
T09291
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130990097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smil03032
]
130990097
Enzymes [BR:
smil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130990097
DNA replication proteins [BR:
smil03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
130990097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF5321
IMD
DUF1744
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
130990097
NCBI-ProteinID:
XP_057770285
LinkDB
All DBs
Position
6:26855398..26865809
Genome browser
AA seq
1578 aa
AA seq
DB search
MSDEEPVIAGRRRTRGAGASARSEALERLKALRRGGRRDQDAAGFQIKMEQPIYDTVDED
EYEALVAKRRDEAKGFIVDDNGLGYGDEGQEEDWSVAGASLSSEESEGESERSRKKKKVL
NSDKKEKEAAKRPSPLASAAALMGKQRISNMFTSSVFKKDIQKNVSCDSIVDDVIAEFAP
DENDRERRRRANSNNLGLNKSSNLGVLPVKLEKPFVNSYTIKNDIHETNSGNGDVGVDHS
EKYNIIVDEGNSAIDAEKGSDAADMIRDEGAKESSETVKNEKNDLLLVSESEGKEVKKNV
YSLNAKLEEAKDPALSASVGWQAVSAGIIDCKGTGFEVGGNQATSSEEKLDFEVESDGSL
PFYILDAHEEIYGANAGNVYLFGKVKSGGTYHSCCAVVRNMQRCVYAVPNVSFIHNDLIT
ELEKRVEESRTSIIACKDSMTKHERDGEKPQISSIDLKGTTAKLEKDLEESQAALRAQLH
ELASELKAEITKELLERNVSTFSMFLVKRNYAFERSDIPHGENYFLKINYPFKDSPLPSD
LKGNNFRALLGTHNSGLEMFLIKRKIKGPSWLSISNFSSCTASQRVSWCKFEVNIDFSKD
IQVSTSSKNISEIPPVVVTAINLKTIINEKQNVNEIVSASVICCHRAKIDTPMVTSDWTR
PGMLSHFTVVRKLEGGIFPMGFTKEAAERNTKAGSTVICYESSERALLNRLMIELHKLDS
DVLVGHNISGFDLDVLLHRVQACRVPSNMWSKIGRLKRSAMPKLQKKGSSVFGSGASPGI
MSCIAGRLLCDTYICSRDLIKEVSYSLSQLAKSQLNKDRKEINPHDIPEMFQSSGSLMEL
IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWHKTLQGARAQRVEYLLLHAFHAKKF
IVPDKFSPQSRDTRTVKRKSSAGADENDLDDTNFDEAPEDSHGKTKKGPSYAGGLVLEPK
KGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSPDGSVPRLPSSKKTGVLPELLRNLVE
RRRMVKSWLKTATGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELTTLQGRE
ILQSTVDLVQNTLNLEVIYGDTDSIMIYSGLDDIGKAKAIAGKVIQEVNKKYRCLEIDLD
GLYKRMLLLKKKKYAAVKMHFKDGISYEVIERKGLDMVRRDWSLLSKELGDFCLGQILSG
GSCDDVVEVIHSSLMKVQEEMRNGQIPLEKYVITKTLTKPPEAYPDSRSQPHVEVALRLK
RSGYVTGCSAGDTVPYVICCEQGTGSTSSFGIAQRARHPDELKKDNGNWIVDIDYYLAQQ
IHPVISRLCASIQGTSPARLADCLGLDSSKFQNKSIDSARNDPSSLLSFVLDDEERYLGC
EPLVLSCPSCSGTFRCSPILTSVCTYINTKPEDVQAGSTNNFWQKLCCPRCPEGDVGKIT
PAIIANQVKRQAERFVSIYYKGLMMCDDETCNYTARGVNLRALGDSERGTTCPNYPHCNG
HLVRKYTEADLYKQLTYFCYTLDTVRCISKMEADKRLAVDKEVARIRPLVEMAASTVESI
RDRCAYGWVQLKDFVVLV
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaggagccagtaatagccggacgtcggcgcacgcggggcgccggcgcgtca
gcgcgctcagaagcgctcgagcgtctgaaggcactccgccgcggtggccgccgggatcag
gacgccgctggattccagatcaagatggagcagccgatttacgacaccgtggatgaagac
gagtacgaggccttagtcgctaagcggcgtgacgaagccaagggtttcattgtggatgac
aacggcttagggtacggcgatgaaggccaggaggaagactggtccgtcgcgggcgcgtcc
ttatcctccgaggaatccgagggggaatccgagaggtccagaaagaagaagaaagttctc
aattcggacaagaaggagaaggaagcggccaagaggccttctccgctagcctctgcggcg
gccttgatgggtaagcagagaatttctaacatgtttacttcgtctgtgtttaagaaggat
atacagaagaatgtttcgtgtgatagtattgttgatgatgtgattgcggagtttgcacct
gatgagaatgatagggagaggagaaggagagccaattcaaacaatttaggtttgaataaa
tccagcaatttaggggttttgcctgttaaacttgagaagccttttgtaaatagttataca
attaagaatgacattcatgagactaacagcggcaacggtgatgtgggcgttgatcattct
gaaaaatataacattatcgtagatgagggtaatagtgccattgatgccgagaaaggatcc
gatgcagctgacatgattagagacgagggagcgaaggagagtagtgaaactgtaaaaaat
gagaaaaacgacttattgttggttagtgagtctgaagggaaggaggtaaagaaaaatgtg
tattctctgaatgcgaaacttgaagaagctaaggatccagcgctgagtgccagtgtgggg
tggcaagctgtaagtgctggtattattgattgtaaggggactgggtttgaggtcggaggg
aatcaggcaacaagcagtgaggaaaaattagactttgaagtggagtccgatggatcattg
cctttttatatactcgatgcacatgaggagatctatggtgcaaatgccgggaatgtttat
ctctttggaaaggtcaaatcaggaggtacataccatagctgctgcgcagttgtgagaaac
atgcagagatgcgtgtatgcggtcccaaatgtttctttcatacacaacgacttaattact
gagctagaaaaaagagttgaagagtcacgaacatccatcatagcttgtaaggattcaatg
acaaagcatgagagggatggtgaaaagccccaaatttcatccatagatcttaaaggcaca
actgcaaagctagaaaaagatctagaagagtctcaagcagctctacgagctcaactacat
gagttggcatcagaattgaaggctgaaataacaaaggagttactggaacgaaatgtctca
actttcagcatgtttcttgtcaagagaaactatgcgtttgagagatcagacataccccat
ggggagaattatttcctaaagatcaattacccgttcaaggattcaccacttccatcagat
cttaaagggaacaacttccgtgctttgcttggaactcacaatagtgggctggaaatgttc
ctaattaaaaggaaaataaaaggaccatcatggctatcaatatcaaatttctccagctgc
acagcttctcaacgcgtgagctggtgtaagtttgaggttaatattgatttctcaaaggat
attcaagtttcaacttcgtcgaagaatatttcagagattcctccagtagtagttacagct
ataaatttgaaaacaataatcaatgagaaacagaatgtaaacgaaattgtctctgcatcg
gtcatttgctgccacagggctaagattgatactcccatggtaacctcagactggacacgc
ccaggcatgctcagccattttactgttgtgcgtaaacttgagggaggcatatttccaatg
ggttttactaaggaggcagctgagagaaatacaaaggcagggtcaactgttatttgctat
gaaagcagtgaaagggctctattaaatcgtttgatgattgagttgcacaaattggatagt
gatgttctagttgggcacaatatttctggctttgacctggacgttcttctccacagggtc
caggcttgcagggttcccagcaacatgtggtctaaaataggccgtctcaaacgctccgcc
atgcccaaacttcagaaaaaggggagttcagtatttggttcaggagcaagtccgggaatc
atgtcgtgcattgctggccgtctcttatgtgacacatacatttgttctcgtgacctaata
aaagaggtgtcttactccctgtcacaacttgcaaaatcacagctaaataaggaccgaaag
gaaattaatccacatgatattccagagatgtttcaaagttctggatcacttatggaactt
attgagtatggggaaacagatgcatggttgtctatggaactcatgttccatttgagtgtt
cttcccttgacacgtcaattgacaaacattagtggaaatctttggcataaaactctccag
ggtgctagggctcaaagagtggaatatcttttgttgcatgcatttcatgccaagaagttt
attgttccggacaagttttctcctcaatccagagatacaaggactgtaaaacgtaaaagt
agtgctggtgctgatgagaatgatctcgatgatacaaattttgatgaggctccagaagat
tctcatgggaaaaccaagaagggaccttcctatgctggtggattagtgctggagccaaag
aaaggactctatgacaagtatatattacttctggatttcaacagtctctacccttctatt
attcaggaatacaacatttgttttactactgttgaaagatctcctgatggatcggttccc
cgtctaccctctagtaaaaagactggagtactacctgagttgcttagaaatttggttgag
agaagacgaatggtgaaatcatggttaaaaacagcaactggcctcaaagttcaacaactt
gacatacaacagcaagctctaaagctgacagcaaacagcatgtatgggtgcctgggattc
tccaattcaagattctatgcaaaacccctagcagaactaacaacactacaaggaagggag
attttacagagcactgttgatcttgttcaaaatactctaaatctagaggttatttatgga
gacacagattcaataatgatatatagtggactcgatgatattggaaaagctaaagctata
gcggggaaggtcattcaagaggttaacaagaaatataggtgtcttgagattgatctggat
ggcttatacaaaagaatgcttttgctcaagaagaagaaatatgcagctgtcaaaatgcat
tttaaggatggtatatcgtatgaggttattgagcgtaaaggtcttgatatggttcggcgt
gattggagtttgctatccaaggaattaggagatttctgtctcggtcaaatattatctggc
gggtcctgtgacgatgttgttgaagtgatacacagctctctcatgaaggtacaagaggaa
atgaggaatggacaaataccacttgaaaaatatgtgatcacaaagacactaaccaaacca
cctgaagcatatcctgattccagaagtcagcctcatgtagaagtagcacttagactgaag
agaagtggttatgtaactggttgttctgctggagatacagtaccttatgtcatttgctgt
gagcagggaactggttctacttcctcatttggaatcgcccagcgggcgagacatcctgat
gaactgaaaaaagacaacggaaactggattgttgacattgactattacctagcccagcag
attcaccctgtaatatctcgtctatgtgcatcgattcaaggtacaagtccagcacgtttg
gctgattgtttggggcttgactcatcaaagttccagaataaatcaattgattctgccaga
aatgatccgtccagcttgctatcatttgtattggatgacgaagaaagatatcttggttgt
gaacctttggttttatcgtgcccaagctgctcgggcaccttcagatgctcgccaatattg
acatcagtttgtacatatatcaataccaagccagaagatgtgcaagcaggatcaactaac
aatttctggcagaaattgtgctgtccgaggtgcccagaaggagatgttgggaaaataact
cctgccattatagctaaccaggtgaaaagacaagctgaaagatttgtgtcaatatattac
aagggcctgatgatgtgtgatgacgaaacatgcaactacactgcacgtggtgtgaatctc
cgtgcactaggggattccgagagaggaacaacttgtccaaattatcctcattgtaatgga
caccttgtcagaaagtacacggaagcagatttgtataaacagctgacatacttctgctac
actttagacactgtacgctgcattagcaagatggaggccgataagagattggccgtagat
aaagaagtagcaagaatcaggcctctggttgaaatggcagcgtcgacagtggagagcatc
cgtgatagatgcgcctacgggtgggttcagctcaaagactttgttgttttagtttag
DBGET
integrated database retrieval system
