Salvia miltiorrhiza (redroot sage): 130990169
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Entry
130990169 CDS
T09291
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130990169
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130990169
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130990169
NCBI-ProteinID:
XP_057770367
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Position
6:15803800..15806209
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AA seq
383 aa
AA seq
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MTIKCISSLILLVLPLILAYHTFAQPQIFDITTYGATPDTDISEALLNAWEDAIVSANES
KIVIPQGTWMLSQAELAGPGLGPIEIENQGTVLANADPNSMPNPKAQWIAVNYVNSFTLS
GHGVFDGQGALQAWATNDCNVNRNCSKLPINLSFNFMNNSVIQDVTSKDSKNFHINCLAC
MNVSFIRLTVVAPGDSPNTDGIHVARSTMVNIADSVIATGDDCVSMGDDLTQVYIHNVTC
GPGHGISIGSLGRNLNERNISGIYVKNCSFIQTQNGVRIKTWPSAPATIILSNLHFENLI
MQNASNPIIIDQQYCPWNLCNLTSPSLIEIRQVRIKNVKGTTSSSHAVKLSCSSAKPCDD
VKIGDVDITSAKMEGTKLGFSLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacaattaagtgcatttcctcattaattctactagttttgccattaatcttggcatat
catacctttgcgcagccccaaatctttgatattacaacttatggtgctacaccggataca
gatatcagtgaggctttattgaatgcatgggaggatgcaattgtatcagcaaatgaaagc
aaaatagtgattccacaaggaacatggatgctaagccaagcggaattagccggtccgggt
ttgggtcctattgagattgaaaatcaaggcactgttttagcaaatgcagatcctaattcc
atgcccaaccccaaagcccaatggatcgcggttaattacgtcaattccttcaccctctcc
ggccacggcgttttcgacggtcagggcgccctgcaagcctgggcaaccaacgactgcaac
gtcaataggaattgctccaagcttccaattaacttgagcttcaattttatgaacaactcc
gtgattcaagatgttactagcaaagacagcaagaattttcatataaactgtctagcatgc
atgaacgtgagcttcatccggctgacggttgttgccccgggcgacagtccgaacaccgac
ggaatccacgtggcccggtccacgatggtcaacatcgccgattccgtgatcgcaacggga
gacgactgcgtgtcgatgggcgacgatctcacacaagtctacatccacaatgtaacttgc
gggccgggccacggcatcagcattggaagccttggaaggaacctcaatgagaggaacatt
tctggcatatacgtcaagaattgcagcttcatccaaactcagaatggtgtgaggatcaag
acatggccatctgccccagccaccatcatattgtctaaccttcacttcgaaaatttgatc
atgcaaaatgctagtaatcctattatcatcgatcaacaatactgcccttggaatttgtgc
aatttaactagcccatcacttatcgaaattaggcaagtgagaatcaagaatgtgaagggg
acaacaagtagttcacacgcggtgaagctttcttgcagttcagctaagccatgcgacgat
gtgaaaattggagatgtagatattacaagtgctaaaatggaaggaaccaagctcggattt
tccttgaggtaa
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