Salvia miltiorrhiza (redroot sage): 130990171
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Entry
130990171 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130990171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smil03036
]
130990171
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
130990171
INO80 complex (yeast)
130990171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130990171
NCBI-ProteinID:
XP_057770371
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All DBs
Position
6:complement(15837745..15848932)
Genome browser
AA seq
1511 aa
AA seq
DB search
MDSKRKYTYGNLFNLEPLMNFQLPKQDEDFDYYGNSSQDESRGSQGGDMNGIMSERGSKK
KRRSAYSSDEEETGSYSSYISEERYRAMLGDHIQKYKRRLNHAPQNPAARTGTMAIKTNV
ALKDQKAMNDNRGGFPKFESTSDFLNSSSSQKLGNYPESDFGLQYGASRPNLEPAFLDIG
DGITYRIPLPYEKLSSSLSLPSMSDIRVEEFYLKGTLDLGSLDAMMASDNKFQQRSRAGM
GDQRPQYESLQARLRAQQTNNSAENFCLSISETALGTDGIPEGAAGRIRRSILSEGGTLQ
VYYVKVLEKGDTYEIIERGLPKKPKVKKDPSVIEREEMEKLSKYWVNIARKEIPKHHRIF
TNFYRKQITDAKRVSEICQREVKMKVSRSLKLMRGAGIRTRKLARDMLVLWKRVDKEMAE
VRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTSQPSGALAVGDEK
SNDQEILSEDQQQEEDDPEAAELRREALRAAHDAVSKQKKMTSAFDNECLKLRLAGEAEA
PLQDGLVTESSNIDLLHPSTMPVASTVQTPEMFKGSLKEYQLKGLQWLVNCYEQGLNGIL
ADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGG
LQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSSN
SIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIESHA
EHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTGKTEVTVHCKLSSRQQAFYQAIKNK
ISLAELFDGNRGHLSEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFHFGDVPNSLLPP
PFGELEDVFYSGGRSPIAYEIPKLVYQETVGGSKVHNSEAGQYLSSKSIQKLFNIFSPEN
ISSSSLQKDYSSDHNSGRSGAFEFSRFIDLSPAEVSFLATGSFMEILLFSIMRSDRQYLD
TILDLLMESDDDDVHDIQHAHIGTEKVRAVTRMLLLPSRSEKNVLRRKLATGPTDAPFEA
LIMTYQDRLLSDIKLVHSVYSFIPRTRAPPINVRCSDRNFAYKMAEEWHHPWLKRLLTGF
ARTSDCNGPRKPTGTHPLIQEIDAELPIIQPALQLTYKIFGSCPPMQPFDPAKMLTDSGK
LQTLDILLKRLRAQNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKD
FQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVY
RLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEQKLKEVS
QQAKDRQKKKSGAKGIRIDAEGAASLEDFANAELQDNDFEPQDPEKTKSSSKKRKPGGDK
QTQPKARAQKGSKQVDSSSPNRTIADYEHEDPSQHAESIQQRPKRLKRPTKSVNENIEPA
FTAIQHQSSEL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggactccaagcggaagtatacttacggaaatctattcaatcttgagcctttgatgaac
tttcaactgccgaaacaagatgaagattttgattattatgggaatagtagtcaggatgag
agcagaggtagccaagggggagacatgaatggaataatgtcggagaggggatcaaaaaag
aagaggcggagtgcttatagcagtgacgaggaagaaacaggcagttacagttcgtatatt
tcagaggagcgatatcgtgcaatgcttggagatcatattcagaagtacaagaggaggctc
aatcatgcaccccaaaatcctgcggcaagaaccgggacaatggcaatcaaaactaatgtg
gcccttaaagatcagaaagcaatgaatgataacagaggaggatttcccaagtttgaatca
acttcagattttctaaacagtagtagttcccaaaaactaggaaactatcctgaatcagat
tttgggctgcaatacggtgcttccagaccaaatcttgaaccagcttttcttgatattggg
gatggcatcacatataggattcctcttccttatgaaaagctatcatcatcactaagtttg
ccaagtatgtcagatatccgagtggaggaattttacttaaagggcacccttgacttgggg
tcattagatgcaatgatggcttctgataacaagtttcagcagagaagcagggcagggatg
ggtgatcagcggcctcagtatgaatctcttcaggcaagattgagagcccagcagaccaat
aactctgctgagaatttctgtctaagcattagtgaaacagcattgggaactgatggcatt
ccagaaggggcagctggaaggattagacgatctattttgtcagaaggtggtacattgcag
gtttattatgtaaaagttttggagaagggggatacatatgagattattgaacgtggctta
cccaagaagccaaaggtgaagaaagatccttctgttattgagagggaagaaatggaaaag
cttagtaaatattgggttaatatagcaagaaaagagattccaaaacatcacaggattttc
accaacttctacagaaagcaaataactgatgctaagagagtttctgaaatctgtcaaaga
gaggtgaaaatgaaagtcagcagatccctcaaattgatgaggggtgctggaatcaggaca
aggaaactggctagagacatgctagtgctttggaagagagttgacaaggagatggcggaa
gtgaggaaaagagaggaaaaagaagctgctgaagctctgaagcgagaacaagaacttcgt
gaagctaagaggcagcagcagaggctcaattttctgttgtcacagacagaactttacagt
cacttcatgcagaataagacctcacagccctctggagcattagcagtgggtgatgaaaaa
tctaatgaccaagaaattctttcagaagatcagcagcaggaggaagatgatcctgaagct
gctgaattaagaagggaagctctcagagcagcccatgatgcagtttcaaagcagaagaaa
atgactagtgcatttgataatgaatgcttaaagctacgtctagctggagaagctgaggcc
cctctccaagatggcttggtcactgagtctagcaatattgatctgctgcacccgtcaacc
atgcctgtagcatcaacagtgcagacgcctgagatgttcaagggttcccttaaagaatat
cagctaaaaggccttcagtggcttgtaaattgttatgagcagggcttaaatggtattctt
gctgatgagatgggtctgggaaagacaattcaagccatggcattcttggcccatttggct
gaggaaaaaaatatatgggggccttttctggtggttgctcctgcttctgtgttgaataat
tgggctgatgaaatcagccgtttctgtcctgacttgaagactcttccatattggggtggt
cttcaggagcgtacagtgcttaggaagaacattaacccaaagcgtctttatcgaagagaa
gctggatttcacattctcatcaccagttaccagctgctggtttctgatgagaagtacttc
cgccgcgtaaagtggcaatacatggtgttggatgaagcccaggcaatcaaaagttctaac
agtataagatggaaaacactgctcagtttcaattgccgaaatcgcttgcttctgactgga
actccaattcaaaataacatggctgaattgtgggcactcttacattttattatgccaact
ttatttgatagccatgagcaattcaatgagtggttttcaaaaggaattgagagtcatgca
gagcatggtgggacattaaatgagcaccagcttaatcgattgcatgccattctgaaacct
ttcatgctgcgaagagttaagaaggatgtcgtctctgagctgacaggaaaaaccgaagtt
accgtacactgtaaattaagttctcgacagcaagctttttaccaagctataaagaacaag
atatcccttgcagagttgtttgatggaaaccgtggacatcttagtgaaaaaaagattcta
aacctgatgaacattgtcatccagctaagaaaggtgtgcaatcatccagaattatttgag
agaaatgaaggaagcacatattttcattttggagatgtcccaaattctcttctccctcct
ccctttggcgagctggaagacgtcttttactctggtggcagaagccctattgcatacgag
ataccaaaactggtctaccaagagactgttggtggttccaaggttcacaactcagaagct
ggccagtatttaagcagcaagtcaattcagaagttatttaacatattctcaccagaaaat
atctccagttcttcactccaaaaggactacagttcggatcataattctggacgaagtgga
gcatttgaattctcccgctttattgatctatcaccggcagaagtgtcattcttggcaact
ggttctttcatggagatattattattctctattatgagatcagatcgccaatatttagac
acaatattggacctgttgatggaaagtgatgatgatgatgtccacgatatccagcatgcc
catattggcacggaaaaagtgagagctgtcacacgaatgttgctactgcctagtaggtcg
gagaaaaatgttcttagaagaaagcttgcaacaggtcctacggatgctccatttgaggct
cttatcatgacttaccaggataggcttctatctgatatcaagcttgtgcattcagtatac
tcgttcatccctagaactagggcacctccaataaatgtccgctgttcagatagaaacttt
gcatacaagatggctgaagaatggcatcacccctggttaaagaggttgttgactggattt
gcacgaacatctgattgtaatggcccaaggaaaccaactggcactcaccctttaatacaa
gagattgacgctgaattaccaatcatacaacctgcccttcagcttacatacaagatcttc
gggtcttgtcctcccatgcaaccatttgatcctgcaaaaatgttgacagattctgggaag
cttcaaacacttgatatacttctgaagcgtctacgggcacaaaatcatcgtgttcttctt
tttgcacaaatgacaaaaatgctgaatatcctcgaggattatatgaactacaggaaatac
cggtatttgaggcttgatgggtcatccacaataatggatcgccgtgacatggtgaaagat
ttccagcaccggagtgatatctttgtgttcttgctgagcacaagagctggtgggcttgga
atcaacttgacagctgctgacacagtcatattttatgaaagtgactggaatccaactttg
gatttacaggcaatggatcgggcccatcgtctgggtcaaactaaggatgtaactgtgtat
cgcttaatctgtaaagagacggtagaggaaaaaattctgcagagagcgagtcagaaaaac
accgtccagcagcttgtgatgacgggtggtcatgtccaaggtgaccttttggctcctgag
gacgttgtatcattattgatcgatgatgctcaactggagcaaaaactaaaagaagtctca
caacaggcaaaagatagacaaaagaagaagagtggtgctaagggcatcagaatcgatgca
gaaggagctgcgtctttggaggattttgctaatgctgaattacaggacaatgactttgaa
cctcaagatcctgaaaaaacaaaatccagcagcaaaaagaggaaacccggtggtgacaag
caaacacagccgaaagcaagggctcagaagggctcaaagcaggttgattcatcatcacca
aatcgaacaatagcggactacgaacacgaggatccctcacagcacgccgaatcgatacag
caaagaccaaagaggttgaaaaggccaacaaagagtgtgaatgagaacatcgaacctgca
tttacagctattcaacaccagagctcagaactgtag
DBGET
integrated database retrieval system
