Salvia miltiorrhiza (redroot sage): 130990439
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Entry
130990439 CDS
T09291
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130990439
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130990439
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
HTH_7
NosD
Motif
Other DBs
NCBI-GeneID:
130990439
NCBI-ProteinID:
XP_057770654
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Position
6:7954101..7956918
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AA seq
410 aa
AA seq
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MFVVLSLVLASSSSPYLAWASDEASYFNVTDYGAIGDGRTENSQAFLKVWNVACKASVKS
PTIYVPRNKTFLVNPIIFHGPCTALTINFLILGTIVAPDTPKSWDAKNASEWLAVMNTNG
LTVDGFGVIDGQGKAWWDQSCKYHPQLKNCTTLAPTAWKFIKCNNSSVRNMRFINSAQTH
ILITGCDGFVIQNVEIASPGNSPNTDGIHIQASHHLNITHSNITNGDDCISIGDHTSDLS
ISNIQCTLGHGISIGSLGRGGSLVQVENINVTDCIFNQTSNGARIKTWQVGTGYLKHVAF
ERLTFNNVKNPIIIDQNYCNVSGACPELKTGVQISNVSYRHAMGTSATEIAINFNCSKSV
PCHAIAIESVKLTSAIAGKRVTANCSNAYGKEHEIVPGPCLLHETQSKTP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggtgttatcattggttttggcttcgtcgtcttcaccgtatcttgcatgggca
agtgatgaagcatcatatttcaatgtcaccgattatggagccataggtgatggccgtaca
gagaattcacaagcatttctcaaggtgtggaatgtagcctgtaaagcatcggttaaatct
ccgacgatatatgttccacgtaacaagacatttttagtgaaccccataatttttcacggc
ccttgcactgcattaacgatcaatttcttgattttagggacaattgtagcaccggacaca
cctaaatcatgggatgcgaaaaatgcaagcgagtggttggcagttatgaacacgaatggc
ttaaccgttgatggttttggtgtgatcgacggtcagggcaaggcctggtgggaccagtct
tgcaaatatcatcctcaattgaaaaattgcacgactttagctccaactgcgtggaagttt
attaaatgcaacaacagcagtgttaggaatatgaggtttataaatagtgctcaaacgcac
atactcatcacggggtgcgatggcttcgttattcaaaatgtggaaattgcgtcaccggga
aacagccccaacaccgacggcattcacattcaagcatctcaccatctcaacatcacccat
tctaacatcaccaacggtgatgattgtatatcaattggtgaccacacttctgatctcagc
ataagcaatattcaatgtacacttggtcacggaatcagcattggaagtttaggaagagga
ggaagcctggtgcaagtagagaacatcaatgtaactgactgcatcttcaatcaaacctca
aatggagctcggatcaaaacatggcaggtgggaacaggatatctcaagcacgtcgcattt
gaaagacttacattcaacaacgtcaagaatcctataatcatcgaccaaaactactgcaac
gtcagtggcgcatgcccggagctgaaaactggagttcaaataagcaatgtatcttaccga
catgcaatggggacatcagcaacggagatcgccattaatttcaactgtagcaagtctgta
ccgtgtcatgcaatagcgattgaatcagtaaagctaacatcagccatagctggaaaacga
gtcactgcaaattgtagcaatgcatatggtaaagaacatgaaatcgttcctggcccgtgt
cttctacatgaaacacagagcaagacgccatga
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