KEGG   Salvia miltiorrhiza (redroot sage): 130991267
Entry
130991267         CDS       T09291                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
smil  Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:smil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smil03400]
    130991267
DNA repair and recombination proteins [BR:smil03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    130991267
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_2 DEAD zf-RING_UBOX ResIII zf-C3HC4_2 Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-RING_4
Other DBs
NCBI-GeneID: 130991267
NCBI-ProteinID: XP_057771357
LinkDB
Position
7:348194..354599
AA seq 927 aa
MQLARNGRNAKRARPAENALSAVVIEDGDFPEEPGWMLVGRTVVTGISTTKGRKLENNEI
VHFAFPGPNTRTKISTHFMSSKAANAASSIVRFSTKRYGEIGRLPMEWAKCLIPLVNSSK
VKVLGRCVAAPVNLCMMQEIMLYVSFYIHETVFSEVDKSWKLEATNIDATIYPLLKLFEL
LKVRPFQKAQFTPEELDSRKRLLQLDDDSDNTASLLPSLKIRRASQDHKIHENHEQVISE
SSLNRLVGAVDTYNLEEMEPAETLACDLRPYQKQALYWMSELEKGANHEESEKTLHPCWA
AYRVCDERAPEIYVNQFSGEATTEFPNAMQMARGGILADAMGLGKTVMTIALILSRRGHG
IPDDQKVVADGGSNDINNSQRSSNSLRRKKGGTLIVCPMALLSQWKDELEAHSKPDSITV
FVHYGGDRTGDPKVLAEPDVVLTTYGVLTAAYKSENINSIYHRVEWHRVVLDEAHTIKSS
KTIAAKAAFALSSYCRWCLTGTPLQNNLEDLFSLLCFLHVEPWCNWAWWNKLIQKPYDNG
DMRGLQLVKAILKPLMLRRTKESKDKQGRPILVLPPTDVKVIECEQSEAEQDFYDALFRR
SKVQFDQFVAQGKVLHNFANILELLLRLRQCCNHPFLVMSRADTTAYSDLNKLARRFLQS
NSDAGCGTGPSRAYVEEVVEGLRNGENAECPICLESSDDPVLTPCAHRMCRECLLSSWRT
PASGVCPICRQMISKSDLITCPSGNKFRVDVEKNWKESSKISKLLECLEKIRSSGSGEKS
IVFSQWTSFLDLLEIPLRRRNFGFLRFDGKLAQKQRGKVLHEFAESQEKTVLLMSLKAGG
VGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKLTVRVRRFIVKDTVEERLQQVQAR
KQRMIAGALTDEEVRSARIEELKMLFR
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgcaattggcgcgtaatggacgtaatgctaaaagagcgaggcctgcggagaatgcctta
agtgcggtggtgattgaggatggtgattttccggaggagccgggctggatgttggtgggg
aggacagtggttacggggatctcaacgacaaagggcaggaaattggagaataatgagatt
gtgcattttgcctttccaggtcctaacacaagaactaagattagcacccattttatgagt
tcaaaggctgctaatgctgcctccagcattgttcgtttctcaacaaagagatatggagag
attggtcgtttaccaatggaatgggccaaatgccttattccacttgtaaattcatcaaag
gtgaaagttcttggccgttgtgtggctgctccagttaatctttgcatgatgcaagagata
atgttgtatgtgagcttctatattcatgaaaccgtcttttcggaagttgataaatcatgg
aagcttgaggctacaaacattgatgccaccatatatcctctcttgaagttgtttgaactg
ctaaaagtcaggccatttcaaaaggcacagttcacaccagaagaacttgactctagaaag
cgcttactacaattagatgatgattcagacaacactgcctctctgttgccttcattaaag
ataagaagggcctctcaagatcataagatccatgaaaatcatgagcaagttatttcagaa
tcatccttgaataggcttgttggtgctgtagatacgtataacttggaggagatggagcct
gcagagactcttgcttgtgatttgaggccataccagaagcaggctctttattggatgtct
gaattagagaaaggtgcaaatcatgaggaatctgagaagacccttcatccgtgctgggca
gcttatcgtgtgtgtgatgagcgagctccggagatttatgtgaaccaattttctggggaa
gcaactacagaatttccaaatgccatgcagatggctagaggagggattttggcagacgca
atgggactcgggaagactgtaatgacaattgctctgatactatcgagaagaggccacggc
attccggatgatcaaaaagtcgtcgctgatgggggttcaaatgatatcaataatagccaa
aggagttctaacagcctgaggagaaagaaaggtggcactctaattgtttgtccgatggct
ttacttagccaatggaaggatgagcttgaagcccattcgaaaccagatagcatcacagtc
tttgttcattacggcggggacagaactggtgaccctaaggtgctagcagaacctgatgtt
gtcttgaccacatatggtgtactgactgctgcatataaaagtgaaaatattaacagcatt
taccacagagtagagtggcatcgtgtggttctagatgaagctcatacaatcaaatcatca
aagactatagctgctaaggctgcatttgcattgtcctcatattgccgctggtgtcttact
ggtactccccttcagaacaatttggaagacctgttcagccttttgtgcttcttgcatgtt
gaaccatggtgcaattgggcctggtggaacaagctgattcagaagccttatgataatggt
gacatgagaggattgcaattggtgaaagcaattctcaaaccccttatgttgaggagaaca
aaggagtctaaggataaacaaggaaggcccatacttgttctaccaccaactgatgtcaag
gtcattgagtgtgaacaatctgaagccgagcaggacttttatgatgctcttttcaggaga
tctaaagtacaattcgaccaatttgttgctcaaggaaaggttctccataactttgcaaat
attctcgagctgctacttcgactgaggcaatgttgcaaccaccctttcctagttatgagt
cgagctgatacaacagcttattcggacttgaacaaactggcgaggaggttcctccaatct
aactctgatgcaggctgtggaactggcccttctcgagcgtatgttgaagaagttgttgaa
ggtcttcgcaatggtgaaaatgctgaatgccccatttgcctagagtcttcagatgaccct
gtgttgacgccctgtgcgcataggatgtgcagagaatgtcttctctctagctggaggact
ccagcttccggggtctgccccatttgcaggcagatgatcagtaaatctgatctcatcacg
tgcccatctggaaacaaattcagagttgatgttgaaaagaactggaaggaatcatcaaag
atatccaaactcttggagtgcttagaaaagattcgcagctcgggttctggtgaaaagagc
atagtattcagccagtggacttcattcttggatctcttggaaattccactcaggaggaga
aattttggattcttgagatttgatgggaagttggcgcagaaacaacgagggaaggtcctc
catgagtttgctgagagtcaagaaaaaacggtactgttgatgtcgcttaaagcaggtggc
gtgggcttgaatctgactgctgcttcaaatgtcttcctaatggatccatggtggaatcct
gcagtagaggagcaagcaatcatgcgaattcaccggattggccaaaagctgactgttcgt
gttagaagattcattgtcaaggacaccgtggaagagcgactgcagcaagttcaagcacga
aagcaacggatgattgccggcgccctgactgacgaagaagtccgatcggccaggatcgag
gaacttaagatgctgtttagataa

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