Salvia miltiorrhiza (redroot sage): 130991287
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Entry
130991287 CDS
T09291
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130991287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
130991287
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130991287
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
Motif
Other DBs
NCBI-GeneID:
130991287
NCBI-ProteinID:
XP_057771387
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Position
7:complement(494687..497232)
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AA seq
332 aa
AA seq
DB search
MEAPKHTCLKLEIAMGGGEPVPIFVKGTWYPTRFDLAITDGHRAWTCNATEEAVEERASY
WDQTASYYIDLAERYLGFQQPGSVYGFSDAGDGCKRLSWTFEKEGMKLEWRWKCQPSPNS
KATTVEVLDFLMDANIKLSEEVVWKSQSFDKLKLEAEKCLAQSEKLSSDKSEFESEIYGK
FVQVLNSKKAKLRALRDRLSRQPSAENFPQEDEVSSDRTESLDEESDEERDRHSRRPPAV
KKTDKEEVSSDRTESFDEEGEDTAKNGGVSSSKKADKLSRPRPAVKKPENEEVSSDRTES
FGGEDEDDAAKNGGVSSSKNAPTINSRGRKRK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccgaagcacacatgcttgaaactcgaaatagcgatgggcggcggcgaaccc
gtacccatttttgtgaagggtacatggtacccgacccgcttcgaccttgccatcaccgac
ggccaccgagcttggacttgcaacgctactgaggaagcggtggaggagagagcgtcgtat
tgggatcaaacggcgtcgtactacattgacttggccgagaggtatctcggatttcagcaa
cccgggtcggtttacgggttctcggatgctggagacggttgcaaacggttatcgtggacg
tttgagaaggaaggtatgaaactggaatggcggtggaaatgccagccttcgcccaatagc
aaggcaaccacagtggaagtgttggactttcttatggatgctaacataaagctgagtgag
gaagttgtatggaaatcgcaatcgttcgacaagctcaaactggaggctgaaaaatgccta
gcacaaagtgagaaactcagcagtgacaaatcagagtttgaatctgaaatctatggaaag
tttgttcaggtcttgaactccaagaaagcgaaactgagagcgctacgcgataggctctcg
agacaaccctcggctgaaaattttcctcaagaagatgaagtgtcctcagacaggactgag
agcttagacgaagaaagtgatgaagagcgcgacaggcactccagacgacccccagctgtc
aaaaaaaccgataaagaagaagtgtcctcagacaggaccgagagctttgacgaagaaggt
gaagacacggcaaagaatggcggtgtttcctcctctaaaaaggccgataagctctccaga
ccacgcccggctgtcaaaaaacccgaaaacgaggaagtgtcctcagacaggactgagagc
tttggcggagaagatgaagacgacgcggcaaagaatggcggcgtttcctcctctaaaaac
gccccaaccattaattcccgtggtagaaaaaggaagtaa
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