Salvia miltiorrhiza (redroot sage): 130991532
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Entry
130991532 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130991532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130991532
03009 Ribosome biogenesis [BR:
smil03009
]
130991532
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130991532
Spliceosome [BR:
smil03041
]
Complex A
U1 snRNP components
U1 related factors
130991532
Complex B
130991532
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
130991532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130991532
NCBI-ProteinID:
XP_057771787
LinkDB
All DBs
Position
1:51458965..51463055
Genome browser
AA seq
507 aa
AA seq
DB search
MSRYDSRSADPGSYRDRRGDSGFGYKREYESSYRSSSSAKKDSDGGAEAAPRKSELDGLT
PFEKNFYVESQSIAAMSESDVEEYRRRREITVEGKDVPKPVKSFNDVGFPEYVLQEIEKA
GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV
LAPTRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEVVIATPGRLIDML
ESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLYWSATWPKEVEQLARR
SLFNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGC
DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRAGKSPIMTATDVAARGLDVKDVKYVI
NYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELVSM
GRGAPPPPAYGGSRDRGRGYGGGRSWN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagccgctccgctgaccccggctcctaccgtgaccgccgcggggat
tcggggttcggttataagagagaatacgagagcagttatcggtcctcgtcctcggcgaag
aaagactccgatggcggggcggaggctgcgccacggaagtcggagttggatggtctgacg
ccgtttgagaagaatttttacgtggagtctcagtcaattgctgctatgtcggaaagtgac
gtggaagagtataggcggcggcgggagataactgttgaagggaaggatgtgccgaagccc
gttaagagttttaacgatgtcggttttccagaatatgtcctgcaagaaattgaaaaggct
ggatttactgaacctacacctattcaagctcaaggttggcctatggctttgaagggacgg
gatcttattggtattgcagaaacagggtccgggaagacacttgcttatctcttacctgct
attgttcatgttaatgcacaaccattcttagctccgggagatggtccaatagttttagta
ttagctccgactcgcgaacttgctgtacaaatacaacaagaggccactaaatttggtgca
tcttcaaagattaagaacacatgcatatatggaggggtccctaagggaccccaagttcgt
gatctccagaaaggtgttgaagttgtcattgctacacctggaaggttaattgatatgttg
gaatctcaccataccaatttgcgaagggtaacatatttggtcttggatgaggcggatcgg
atgttagacatgggttttgagcctcagattcgaaaaattgttgatcagatccgcccagat
cgtcaaactttgtactggagtgccacatggccaaaggaggttgagcaacttgctcggagg
tccctttttaatccatataaagtaattattggttcaccagatctgaaagccaaccatgca
attcgccagcatgttgatattgtatctgagaatcaaaaatacaacaaattagtgaaactg
ctggaggacattatggatggtagccggattttgatttttatggacactaagaaagggtgt
gatcagattactaggcagctccgtatggatggttggccagcactatctattcatggagat
aaaagtcaagcagagagagattgggttttgtcagaattcagggcagggaagagtcccata
atgactgctacagacgtcgcagctcgcggtctagatgtcaaggatgtgaaatatgtgatc
aattatgactttcctggatcgttagaggattatgttcaccgtattggtagaactgggagg
gctggtgctaaaggtactgcatacacttttttcactgctgctaatgctaggtttgccaag
gacctcattaatatcctggaagaagctggacagaaggtcagtcctgagctggtatctatg
ggacgcggtgcacctcctccaccagcatatggtggttctcgagatcgtggaaggggatat
ggtggcggtcgctcttggaactaa
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