Salvia miltiorrhiza (redroot sage): 130991833
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Entry
130991833 CDS
T09291
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130991833
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smil01009
]
130991833
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130991833
03036 Chromosome and associated proteins [BR:
smil03036
]
130991833
Protein phosphatases and associated proteins [BR:
smil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130991833
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130991833
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130991833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
130991833
NCBI-ProteinID:
XP_057772230
LinkDB
All DBs
Position
1:complement(51711980..51719063)
Genome browser
AA seq
519 aa
AA seq
DB search
MDGGGGGGGEVASAAAGPPAPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATG
DRGGRVVLFERTDSKEHGRNRRDLERMDYSVGRHPEFRYKTEFQSHEPEFDYLKSLEIEE
KINKIRWCQAANGALFLLSTNDKTIKFWKVQEKKVKKISDMNADTFKGAGNGSVASSSVS
SGLKQCLANGSYSDRSNNSLSNDLSFPPGGIPSLRLPVITSSETNLVARCRRVYAHAHDY
HINSISNNSDGETFISADDLRVNLWNLEISNQSFNIVDVKPTNMEDLTEVITSAEFHPTH
CNMLAYSSSKGSIRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGR
YILSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVA
TGSYSNLFRVFGCVPGSTEATTLEASKNPMRRQVQTPSRPSRSLGSSITRVVRRGAESPG
VDANGNSFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggtggtggcggtggtggagaggtggcatcagctgcggcgggtccacctgcg
ccgctcgactggaaattctctcaggtcttcggcgagaggacggccggcgaagaagtacaa
gaagttgatatcatctcagcaattgagttcgataaaactggcgaccatctagccactggt
gaccgtggtggaagggttgtgttatttgaaaggactgattcgaaagagcatggtcggaat
cgtagagacttagagaggatggactattcagttggtcgacatcctgagttccgctacaaa
actgaattccagagccatgaacctgagttcgattatctcaaaagtttggagatcgaggag
aaaatcaacaagattcgctggtgtcaggcagctaatggtgccctgtttcttctgtctact
aatgacaaaaccatcaagttttggaaggtccaagagaagaaagtcaaaaaaatttctgat
atgaatgctgacacatttaaaggtgctggaaacggtagtgttgcaagttccagtgtttct
tctggtctgaagcaatgtcttgctaatggcagctattctgaccgatctaacaactcgttg
agcaatgacttgtcctttccacctgggggcatcccctcactgcgattaccagtgatcact
agcagtgagacaaatcttgttgcaagatgcaggagagtatatgctcatgcacatgattac
cacattaattctatctcgaataacagtgatggtgaaacatttatatcagctgatgatctg
cgggttaatctttggaacttagaaataagcaatcagagtttcaatattgttgatgtgaaa
ccaacaaatatggaagatctgaccgaggtgattacatcagcagagtttcatcctactcat
tgcaacatgttagcatatagtagttcaaaaggatcaattcgtctaattgatctgcggcaa
tctgccttgtgtgattcacattctaagctatttgaggaacaggaggcacctggctcaaga
tcctttttcactgagataattgcttcaatatcagatattaaatttgcaaaggatggcaga
tatatactcagtcgtgattacatgacccttaagttatgggatattaatatggattctggc
ccagtgtcgactttccaggttcatgaatatttgagaccaaagctatgtgacctgtatgaa
aatgattcaatttttgataaatttgaatgctgcttgagtggtgatggccttcgagtggca
actggttcttacagcaatcttttccgtgtgtttggttgtgttcctgggagtacagaggca
acaacactggaagcaagcaaaaacccgatgaggaggcaggtccagaccccatcaaggcct
tccagatccctgggcagtagcatcacccgtgttgtccgaagaggtgcagagagtccggga
gttgatgccaatgggaattccttcgatttcactacaaagctactccacttggcgtggcat
ccctctgaaaactcaattgcctgtgctgctgcaaatagcttgtacatgtactatgcataa
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