Salvia miltiorrhiza (redroot sage): 130992051
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Entry
130992051 CDS
T09291
Name
(RefSeq) transcription initiation factor TFIID subunit 15b isoform X1
KO
K13098
RNA-binding protein FUS
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03015
mRNA surveillance pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130992051
09122 Translation
03015 mRNA surveillance pathway
130992051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130992051
Spliceosome [BR:
smil03041
]
Complex A
Other components
Complex A specific factors
130992051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
130992051
NCBI-ProteinID:
XP_057772499
LinkDB
All DBs
Position
7:complement(6270313..6274742)
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AA seq
450 aa
AA seq
DB search
MSGMYGQEGDGSGAPPMGGSGGYGGGGYGGSEGGGGYGGYGGGGGGGYGNRGSGGGGYGG
RGGGGGYGGNRGGGGGGYPGDRGGGYQGDRGGRGGGGGRGGGRGGGSGREGDWRCPNQSC
GNVNFARRTECNKCGTQSPAGGDDRGGRGGGGGGQSRGGRGGGYENSRGGRGNYYDGGSG
RSGNGYDGGSQGRDDGGYGQSPPIAPPSYGGAGGFAPPNAYGGNPNYAPDAVPPPTSYTG
GPTSHPPSYGAPVGYGGDGQGGSRGGGRGGSSGGYGGGPRNPGGYSSAPAEVTEKVKQCD
ENCGDSCDNSRIYISNLPPDVTTDELRELFGSIGQVARIKQKRGYKDQWPWSIKLYTDEQ
GKNKGDAVLSYEDPSAAHSAGGFFNMHDMRGHKISVTMAEKSAPKAQSYGGGGGGGRGNY
GGDRRRDNYRDGGSSGPDRNYHGGNRSRPY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacggccaagaaggcgacggatctggcgcgccgcccatgggcggaagc
ggaggttatggcggtggtggatatggcggttctgaaggcggaggaggctacggaggttat
ggcggcggtggaggtggaggctacgggaatcgaggaagcggtggtggaggctacggtgga
agaggcggaggcggtggatacggaggtaatagagggggtggaggaggtggatacccgggt
gatcgtggcggtgggtaccaaggggatcgtgggggacgcggtggcggtggtggtagggga
ggtggtcgtggtggaggaagcggcagggaaggtgattggcgttgtcccaatcaaagctgc
gggaatgtgaactttgcccgaagaactgagtgtaacaaatgtggtacacagtctcctgct
ggcggtgatgaccgtggcggtagaggtggtggtggtggtggtcaaagtagaggtggaaga
ggtggaggttatgaaaacagcagaggtggaagaggtaactactatgatggtggcagtggt
cgcagtggcaacggttacgatggtggtagtcaaggaagggatgatggtggttatgggcag
agtcctcccattgctcccccttcttatgggggtgctggtggatttgctcctccgaatgca
tatggtggaaaccctaattatgctcctgatgcggtccctccacctacaagttacactggg
ggacctacttcgcaccctccttcatatggtgcccctgttggttatggtggtgatggtcaa
ggtggtagccgtggaggtggacgagggggttcatctggtggatatgggggaggtcctcga
aacccaggaggttatagcagtgctccagcagaggttactgaaaaggtcaagcaatgtgat
gaaaattgtggggattcctgtgataactcaagaatttacatatcaaatttgcctccagat
gtcaccactgacgagctcagagaactgtttggaagtatcggccaagttgcaagaatcaag
caaaagcgagggtacaaagatcaatggccctggagcataaaattatacacagatgaacaa
ggaaaaaataaaggcgatgcagttttatcgtatgaagacccatctgcagcacattcagct
ggaggtttcttcaacatgcatgacatgagaggacacaaaattagcgtcacaatggccgag
aaatctgctccaaaagctcaatcatatggtggcggtggtggtggtggtagaggcaactat
ggaggtgatagacggagagacaattatcgagatggtggttcatctggtccagatagaaat
tatcatggcggaaatcgttcacgtccatactag
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