Salvia miltiorrhiza (redroot sage): 130992075
Help
Entry
130992075 CDS
T09291
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
130992075
Enzymes [BR:
smil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
130992075
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130992075
Prokaryotic type
130992075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
130992075
NCBI-ProteinID:
XP_057772530
LinkDB
All DBs
Position
7:complement(6456611..6460276)
Genome browser
AA seq
504 aa
AA seq
DB search
MAVSLLRIPFSPLWITSLLSRGCSRNSYDFKPLRVTSFSSAAADAEVGSSETAPKWESIR
KKKVVMRVGYVGSDYRGLQIQRNEPDVATIEGELEKAIFKVGGIRDSNFGDFTKIRWARS
SRTDKGVHSLATMIAFKMEIPEFAWNNDPNGIVLARYVNSHLPENIRVFSILPSQRSFDA
RRECNIRKYSYLLPADVIGVKDNSTAGEIDHHLSDFNGILNAFEGDHPFHNYTVRSKYRT
RSPRRVSVKTSPSKMAKLSSGSDSEGSDEEDNNGADESSISEEMEHDSPLSVSERNTDGD
EDSLKEQKNLAVPVLARWLDEPDENDRIGASHFRKIFQCCCGKLDEMSGAKFVEISICGE
SFMLHQIRKMVGTAIAVKRELLPRDILHLSLSKFSRIVLPLAPSEGLFLRSNSFAIRNRP
GNQKRPEMMALVESEEILKSVDDFYRSVMLPQMCMFLDSSNSPWKEWVPTLDANTGIPES
QLDDVRIAWKSWRDKFQSRKKMAS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccttactacgaatccccttttctccactctggattacatcgttattatca
agaggctgctcacgaaactcatacgatttcaagcccctcagagttacatctttcagctcc
gccgccgccgacgcagaagttgggtcgtcggagactgccccaaaatgggaatctattcgc
aaaaagaaagtggtaatgcgcgttggctacgtgggatccgattacagaggattgcaaatt
cagagaaatgaacctgacgtagccaccattgaaggtgaactagaaaaggctatttttaaa
gttggtggaattagagatagcaactttggggattttaccaaaattcgctgggcgagaagt
agccggactgataaaggggttcattcgctggcaaccatgatcgcttttaaaatggagatt
ccagaatttgcttggaacaatgatccgaatggcattgttcttgccagatacgttaattct
catcttcctgaaaacataagagttttcagcatcttaccttcacaaaggagttttgatgcc
cgaagggaatgcaacatccgcaagtattcgtatcttcttccagctgatgttattggagta
aaagataattctacagctggtgaaattgatcatcatttatcagattttaatggtatactg
aacgcttttgagggagaccacccgtttcacaattatacggttcgatctaaatacagaact
cgttctcctcgtagagtctctgtaaagacttctccatcaaagatggcaaagttatcatct
ggctctgactcggagggaagtgatgaagaagataacaacggagccgatgaatcctccatt
tctgaggaaatggagcacgactctcccctctccgtctcagaaaggaacacagatggagac
gaggacagcttgaaggaacagaaaaatcttgctgtacctgtacttgctcggtggttagac
gaacctgatgagaacgacaggattggagcatcacatttcagaaagatttttcagtgttgc
tgtggcaaattggatgagatgtccggtgctaagttcgttgaaatctccatctgtggagag
tcattcatgcttcatcagatacgcaaaatggtaggaactgctatagctgtgaaacgtgag
ttattaccaagagacattctgcatttatcgttatccaagttctcgaggatcgtcttgcct
cttgctccatctgaaggtctgtttctaaggagcaatagttttgctatccgaaacagaccg
gggaatcaaaagaggccggagatgatggcgttggtggaatcagaggagatcctcaaatca
gtggatgatttctatcgatcagtgatgttgcctcagatgtgtatgtttttagactcttca
aactccccttggaaagaatgggtgccgactttagatgcaaacaccggtatccccgaatcc
cagctagacgacgtgaggatcgcttggaagtcgtggcgtgacaagtttcagagtcgaaag
aagatggcgtcttga
DBGET
integrated database retrieval system
