Salvia miltiorrhiza (redroot sage): 130992346
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Entry
130992346 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130992346
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
130992346
Enzymes [BR:
smil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130992346
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130992346
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
130992346
NCBI-ProteinID:
XP_057772934
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All DBs
Position
1:53049182..53054468
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AA seq
553 aa
AA seq
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MASDGAPLISDTTHAHVISAAEADNNDLKLLRLAVRSLPPQILKDLLSNGVCARCIINQF
GLHEQICSRPSVATPVLSAILHESAERGDDGANSSVGENKDAIDVENGFQEVCRVCLGIL
QFLYIDDNGISVRKSHACDFAAAVADPVKQGGYQIDSFSLQVSLPPIVVDNEQAVWSYIK
EKYSSESWFTEKFPLASITVKDFLKLSVANPLEKLLDVKCNDNSFRVRLTYTLSDASAEN
KPFNESNGCYKRRKIDDTDLLKNSADLQKVESHDLTTNSSTECKDDETGLSKFPLKKVNE
CCSLVFQCYKTSVYVGGRYLKYSRNVSQSRWIIDDERMGEASVEEIIGSNILPICQGDNY
KFHAAGREDIDVRMLGTGRPFLVEIQNARQFPSDLLIKKIAMKINSLESKFVRVKNLRFL
GSQGWELMREGEAEKQKQYVALVWISRPFENEDEQKLSSFKDLQILQKTPVRVLHRRSPL
EREKTIHWMKIERIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTYPNVGSILGCRAEILQ
LDVTDVKMDCFQA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgacggcgctccacttatcagtgataccacacacgcgcacgttatctccgcc
gccgaagccgacaacaatgacctgaagctcctccgcctcgccgtccgctcgctgccgcca
caaattctcaaggacttgctgtccaatggcgtttgcgcacgctgtataattaatcaattt
ggtctgcacgagcaaatatgttctcgtccttcagttgcaacgcctgttttgagtgcgatt
cttcatgaatcggcagagcgtggtgatgatggagctaatagtagtgttggggaaaataaa
gatgcgattgatgtagaaaacggattccaggaggtttgcagggtttgtctaggcattttg
cagttcttatatattgatgacaatggaatttcagtgagaaagagtcatgcttgcgatttt
gctgcagcagttgcggaccctgtaaagcaagggggctatcaaattgatagcttctcactc
caagtgtccttgcccccgattgtggtcgataatgaacaggcagtttggtcatatatcaaa
gagaagtatagttctgaatcttggttcacagaaaagtttccacttgcaagcattacagtg
aaagattttttgaaattgtctgttgcaaatcctttggagaagttattggatgtaaaatgt
aatgacaattcattccgagttcgattgacatacacactttctgatgcatcagctgagaac
aagccctttaatgagagcaatgggtgctataagaggaggaaaatagatgacactgatctc
ttgaagaactctgctgatttgcaaaaggttgaaagtcatgacctcactacaaattcttca
actgagtgcaaagatgatgagactggtttgtcaaaattcccgctaaagaaggtcaatgag
tgctgctccttggtttttcaatgctacaagacttctgtttatgttggtgggagatatctt
aagtactctagaaacgtcagccagtcacgctggattatagatgatgaacgaatgggcgaa
gcatctgttgaggaaattattggtagcaacatcctccccatctgtcagggtgacaactac
aagttccatgctgctggcagagaagacattgatgtgcgcatgctgggtactgggcgacct
tttttggttgagatccaaaatgcacgtcaattcccgtctgatctgttgataaagaagatt
gcaatgaagatcaatagtttggaaagcaaatttgtgcgagtgaagaatcttaggtttttg
ggtagtcagggttgggagctgatgcgtgaaggagaagcagaaaaacagaaacagtatgtt
gcactagtgtggatttctcgtccctttgaaaatgaagatgagcagaaattatcatcgttc
aaggacctgcaaattttgcagaaaacaccagtaagggttctccatcgtcgaagtccacta
gaacgtgagaaaaccatacattggatgaaaatagagaggatagctggtagttctcaatat
ttcctattgcacttgtgcactcaggcgggaacttacatcaaggaatttgttcatggggat
cttggacgtacatatcccaatgtcggttcaatcctgggatgcagagcagaaatattgcag
cttgatgtcacagatgtgaagatggattgcttccaggcctaa
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