Salvia miltiorrhiza (redroot sage): 130992571
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Entry
130992571 CDS
T09291
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130992571
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130992571
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
130992571
NCBI-ProteinID:
XP_057773240
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Position
7:complement(12545199..12550407)
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AA seq
636 aa
AA seq
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MSTTKLRLHIRERYVVMENAIVRVTLSKPDGIVTAIKYNHMDNLLETANDESNRGYWDLV
WSEAGSSGTTGTYDRIAATNFEVVVETEEQIELSFSRKWDTSLQGKLAPLNIDKRFILLR
DSSGFYSYAIYERLEGWPGFNLDETRIAFKLKKNKFRYMAMADNRRRYMPLPDDRLPGRG
QALDYPEAVLLVDPIDPQFKGEVDDKYSYSGENEEVKVHGWISMDGGVGFWQIMASNEFR
TGGSTKQDLTSHVGPTTLAMFVSAHYGGEDLVLKFGEGEAWNKVFGPVFIYLNSTNSQPQ
QDPLSLWEDAKQQALEQIESWPYNFPASEDFPKSAQRGNVTGTLLIKDRYVSDDDVVGNG
AYIGLAPPGEVGSWQTEGKGYQFWSRADEEGDFSINNIRIGEYNLYAWMPGFIGGFKHDQ
NLNITPGCKIDMGKLVYEPARDGPTLWEIGIPDRTAQQFYVPDPNPKYINKLYINHPDRF
RQYGLWERYGESYPDRDLVYTVGQSNYTTDWFFAHVPRRKNANSYKATTWQIKFKLEAVE
PNGKYYLRLAIASAAQAELQVRTNNPDQNPALFTSGLIGKDNAIARHGIHGLYWLFNVEM
PSALFIKGINTIYLTQANATSPFQGIMYDYIRLEAP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactacaaaactacggttgcacattcgagaacgctatgtggtgatggaaaatgcc
atcgttagagtcacattatcaaaaccagatggcattgtaactgcaataaaatacaatcac
atggacaatctgctggaaacagccaacgatgaatctaacagagggtactgggacttggtt
tggagtgaagcaggaagtagtggaactacagggacatatgatagaattgctgcaacaaat
tttgaagttgtggtggaaacagaggagcaaatagagttatcattctcaagaaaatgggat
acatccctccagggaaagcttgctccattaaacatagacaaaaggttcatactgcttcgc
gattcgtcagggttctattcgtatgcaatatacgaacggttggaagggtggcctggattc
aacctggacgaaacaagaatcgcgttcaaactgaagaaaaacaagtttagatatatggcg
atggcagacaacaggcgaagatacatgccgttgccagatgacaggctaccggggagagga
caagccttggactatcctgaagctgtactacttgtggaccccatcgaccctcagttcaag
ggagaggtggacgacaagtactcgtactcgggtgagaacgaagaagtgaaggtgcatgga
tggataagcatggatggaggtgtgggtttctggcagataatggctagcaatgaattcaga
acaggaggctctaccaagcaagacctcacctctcatgtcggtcccaccactcttgctatg
tttgttagtgcacactatgggggtgaggatttagtgctcaaatttggagaaggagaggca
tggaacaaagtttttggtccagttttcatttatctcaattctaccaattcacaacctcaa
caagaccccctttcgctttgggaagatgccaaacaacaggcattggagcaaattgagagt
tggccttacaattttccagcatcggaggacttcccaaaatcagctcaaaggggtaacgtc
accggcacattactaattaaagacaggtatgtgagtgatgatgatgtggtgggaaatggt
gcttacattgggttggctccaccaggagaagtagggtcatggcaaacagaaggcaagggt
tatcagttttggagtagagcggatgaagaaggtgattttagcatcaacaacatccgaatt
ggagagtacaatctgtatgcatggatgccaggattcattggaggtttcaagcatgatcag
aaccttaacataaccccaggatgcaagattgatatggggaagttagtgtacgagccagct
cgagatggaccaaccctgtgggaaataggcattcctgatcgtactgctcaacagttttac
gttccagatcctaaccccaaatacattaataaactttatattaatcatcccgacaggttc
aggcaatatggattatgggagagatatggggaatcatatcccgatcgcgatttagtctat
acagttgggcagagcaattacacaactgattggttctttgcccacgttcccagaagaaaa
aacgccaattcatataaagcaacaacatggcaaatcaagttcaaactcgaggcagtcgaa
ccaaatggaaaatactatttgagattggcgattgcatctgcagctcaagctgaattacag
gtacgaacaaataatcctgaccaaaatccagcattgtttacgagtggattaataggaaaa
gacaacgcaattgcgagacatggaatccatggtctttattggctgtttaatgtggaaatg
ccatcagctttatttattaaagggattaacactatttatttgactcaagcaaatgctact
tctccattccagggaatcatgtatgattacatacgcctcgaagctccctaa
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