Salvia miltiorrhiza (redroot sage): 130992639
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Entry
130992639 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130992639
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
130992639
Enzymes [BR:
smil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
130992639
Transfer RNA biogenesis [BR:
smil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130992639
Prokaryotic type
130992639
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
130992639
NCBI-ProteinID:
XP_057773343
LinkDB
All DBs
Position
7:12649964..12653272
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AA seq
344 aa
AA seq
DB search
MFTLSHAPPRFSFPGIFQKSGGLAAAGSKSSSRLFRSLPVSSPPLKELSDERQDGGMLPS
LGYKWSLIISYDGTRFSGWQYQTSTPTVQCLLEEALIQITKLGRDHLCLVGAGRTDAGVH
AWGQVAHFTTPFNYDCLAGIHKALNGLLPPDIRIREIRSVPSEFHARFSVTSKIYHYKIY
NDTIMDPFQRLHVYHSTYKLNPAAMRDAAKHFVGKHDFSAFANTSRNDRTPNPVKNIFRF
DVIETGPVLHLEVEGSGFLYRQVRNMVALLLQVGREAVPPDIVSKILASRDRKELAKYTL
SVPPHGLCLYAVNYNEDHLQLPSGRPATSWGRHHTISKCKLPYY
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgctgtcccacgcgccgccgcgtttttctttccctggaattttccagaagagt
ggagggcttgcagcagcgggatccaaatcgtcgtcccgcctctttcgcagccttcccgtc
agctcgccgcctctcaaggagctgagtgatgaaaggcaggatggtggaatgctcccttct
cttggatataagtggtccttgataatctcttatgatggcacccgtttttcaggatggcaa
tatcaaacgtcaacgccaactgtacaatgtttactggaagaggcactgatccagattaca
aaattaggacgtgatcatctctgtcttgttggtgctggccgaacagatgcaggagttcat
gcctggggtcaggtggcacacttcaccacacctttcaattatgactgcttggccggcatt
cacaaagcattaaatggtcttcttcccccggatatcagaattagagaaattagatctgtg
ccatctgaatttcatgctcgcttttctgttacaagcaagatttatcattacaaaatttac
aacgacaccataatggatccattccaaaggctccatgtttaccacagtacttataaactc
aatcctgctgccatgagggatgctgccaagcattttgtagggaagcatgacttctctgct
ttcgctaatacttcacgcaatgataggacaccaaatccggttaagaatatcttccgcttt
gatgtgattgaaacgggtcccgtgttgcaccttgaagttgaaggatcaggttttctatat
agacaagttcggaatatggttgctttgttgcttcaagtcgggagagaagcggttccacct
gacatcgtctccaagattttggcatctcgtgataggaaggagttggccaagtatacgttg
tcagttcctccccatggtttgtgcctttatgccgtcaactacaatgaggatcatcttcaa
cttccctcaggtcgacctgcaacgagctggggtaggcaccatactataagcaaatgtaaa
ctcccatactattga
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