Salvia miltiorrhiza (redroot sage): 130992874
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Entry
130992874 CDS
T09291
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130992874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130992874
03036 Chromosome and associated proteins [BR:
smil03036
]
130992874
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130992874
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130992874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
GA-like
Motif
Other DBs
NCBI-GeneID:
130992874
NCBI-ProteinID:
XP_057773616
LinkDB
All DBs
Position
7:38539351..38548484
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AA seq
1019 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQPVFGQTSSTTSNPFAPKPFGSSTSPFGSQTGGSIFGGMSTGV
FGAQSSSPLGSTSVFGASSSPAFGSSTPTFGASTGSAFGNSSSAFGGTSVFGQKPTFGGF
GSNTTPSSPFGGSFQQSQPAFGSNLFGSSTPFGAPSQPAFGASSSPAFGAPSTPAFGATS
TPAFGSTASPTFGSTSGGFGVSSSPFGSSTPAFGASSTPAFGASSTPAFGATAAPAFGAT
SSPAFGATTSSAFGASSAPSFNFGSSPAFGQSTSAFGSSPFGATSSFGAQSTSFGAQTTT
PAFGNSGFGQTAFGGQRGGSRVTPYSATPETDGATGTQPAGKLESISAMPVHKDKSHEEL
RWEDYQLGDKGGPAPAGQATAAVGFGGSGFGATSTTFSQSSANPFSSSTSTNPFAPKTPA
FSSSGFGASTGSAFGSSPFAASNTANPFGSTSSTTSSLFGSAAQPFGANTSPSLFNSSSS
SPFGSSIFAASTSQGTASTFGTGLGFGNTQSSPLFQSTTPTLAQTSSPFGQTSAFGQSAS
GYGQSNLFSTPSTGFGGNLFSSSSSLLSSTGALGFGQTTPSLSTPFQSAQSAPGGFNFSN
FGQSQAAAPSGFGGTPGMFSNTAFGQVPGTQGTVAAQAAPMTNPFGTLPTMPQVSIGRTG
TSPSVQYGISSLPVVEKPVPVRISSLLTSRHLSQRRIKLPVRKYHPKSNGPKVPFFNDDE
ETASTPKADAQFVPRENPRALVIRPLEQWHSRSSAEKPKTTGTPVHENGKLHQDGYNYIN
GNRTKDKDASPTEDLMENGMAKEQAKENQKANGVHDGLYTEKGDSYITLTGHRAGEAAIV
YEHGAGIEALMPKLRHSDYYTEPRIQELAAKERAEPGYCRHVKDFIVGRHGYGSIKFFGE
TDVRRLDLESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTEG
PRIDKYKEMLKRKAEDQGAEFVSYDPVKGEWTFRVNHFSVYKLGDDEEESHENVVTCCS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaagcaacccttttgggcagtcatctagtagcccatttgggtctcaacctgtt
tttgggcagactagtagcactactagcaatccttttgcccctaaaccttttggtagtagt
accagcccttttggctcgcagacagggggttccatttttggcggcatgtctactggtgtt
tttggtgcccaatcttcttctcctctaggatccacttctgtttttggtgcatcgtcatca
cctgcttttggaagctcaaccccgacctttggagcttccacaggttctgcatttggaaac
tcatcttcagcatttggtgggacctcagtattcggacagaagcccacatttggtggtttt
ggatccaatactactccatcgagtccctttggaggttcattccagcaatcacaacctgcc
tttgggagcaatttatttggttcatcaacaccttttggtgctcctagtcaacccgccttt
ggtgcatcaagtagtcctgcattcggtgcacccagcactccagcttttggtgcaactagc
acccctgcctttggttctactgcaagtccaacatttggcagcacaagtggtggttttggt
gtgtcaagttctccttttggatcaagcactccagcatttggtgcttcttccactccagca
tttggggcttctagcacaccagcttttggtgccacagctgctcctgcttttggtgcaaca
agcagcccggcatttggtgccacaacctcttctgcatttggtgcttcaagtgctccttca
tttaacttcggatcaagtcctgcatttggccaatcaacttctgcatttggaagtagtcca
tttggtgcaacatcatccttcggagctcaaagtacttcatttggagctcagactacaacc
cctgcttttggtaattcaggtttcggccaaactgcttttggagggcaacgagggggaagt
agagtaactccatactcagcaacacctgagacagatggtgccacaggtacacagccagct
ggcaaactagaatctatctcagccatgccagtccataaagataaaagtcatgaagaactt
cgatgggaggactaccagttaggagataaaggagggccggctcccgctggtcaggctact
gctgctgttggctttggtggttcagggtttggagccacatccactacattttcccagtca
tccgcgaatcctttttcatcgtcaacatctaccaatccatttgctccaaaaacaccagcg
tttagcagttcaggcttcggagcttcaactggttctgcctttggttcttcaccttttgca
gcgtcaaatacagctaacccttttggctctacatcatcaacgacatcctccttatttggc
tccgcagctcaaccatttggagccaacacctctccttctctttttaactcttccagctca
tctccttttgggtcatctatttttgcggcttcaacatcacaggggactgcatctacattt
ggtactggcttggggtttggtaacactcagtcttccccattattccagtcaacgacacct
acgcttgcacagactagttcaccttttggacagacatctgcatttggtcaaagtgcatca
ggttatggtcagtcaaatttgttttctacaccctctacgggttttggtggcaatttgttt
tccagcagttcatcgcttctaagcagcaccggcgccttgggatttggtcaaacaactcct
tcactttctactccatttcaatcggcacagtcagctcctgggggtttcaactttagcaat
tttggccagtcacaagcagctgctccaagtggctttggtggcacccctggcatgtttagc
aatactgcttttggacaagtgcctggcactcaaggtactgttgctgcacaagcagctccc
atgacaaatccctttggaactttacctacaatgcctcaggtgtcaattggtcgcacaggg
acttccccttctgttcagtatggtatttctagcttgccagttgttgaaaaaccagttcct
gtgagaatatcatcccttttaacgtctcggcacctctcccaaaggcgtataaagctccca
gttaggaaatatcaccctaaatccaatggcccaaaggtgcctttctttaatgatgatgaa
gaaacagcaagcacgccaaaagcagatgctcagtttgttcccagggagaatccaagagct
ctagtgattcgtccactggaacagtggcattctaggtccagcgcagagaaaccaaagacc
actggcactcccgtgcatgaaaatggtaaacttcatcaagatggttacaattacataaat
gggaataggaccaaggacaaagatgcttccccaacagaagatctgatggaaaatggtatg
gctaaggaacaagctaaagagaaccagaaagctaacggtgtccatgatggtctttataca
gagaagggtgactcctacataactcttacagggcatcgagctggtgaagctgctattgtt
tatgagcatggagctggaattgaggcgctgatgccaaagctccgccactctgattattat
accgagccacggatccaggagctggctgcaaaggaaagggctgagccaggttattgtcgc
catgtcaaggattttattgttggaagacatggttacggtagcatcaagttctttggggaa
actgatgtgcggaggcttgatcttgagtcacttatccaattcaacaatcgtgaggtgata
gtttatatggatgagagcaagaaacctcctgttggacaaggtctgaacaagcctgctgag
gttacactcctaaacataaaatgctttgataagaagacgggtcagcaatacactgagggg
ccgaggattgacaagtacaaagagatgctgaaaagaaaagctgaggatcaaggtgctgag
tttgtgtcgtatgatccagtcaaaggagaatggacgttcagagtcaaccatttcagtgtg
tataagcttggcgatgatgaagaggaaagtcatgaaaacgtggttacttgttgtagttga
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