Salvia miltiorrhiza (redroot sage): 130993550
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Entry
130993550 CDS
T09291
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
130993550
03036 Chromosome and associated proteins [BR:
smil03036
]
130993550
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130993550
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
Pre-60S particles
Helicases
130993550
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130993550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130993550
NCBI-ProteinID:
XP_057774461
LinkDB
All DBs
Position
7:complement(23228882..23233709)
Genome browser
AA seq
702 aa
AA seq
DB search
MPSVVMAEAQSADKKKIMKKSEVAEMELVEEKSAERKIKKEKKSSKKTKLTSEPDLDGSN
SNISVKIKKEKKRKALEIDGDNEEEKSDTSSEMGEPMNSLAKKKKKMKFEDGHEEEEKEE
NPNAVSNFRISAPLRDNLKAKGIEALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLP
ILESLTNGPAKASRKTGYGKAPSVLVLLPTRELATQVAADFEVYGGALGLSCCCLYGGSP
YQAQQNQLKRGVDIVVGTPGRIKDHIERGNIDFRSLKFRVLDEADEMLRMGFVEDVELIL
GKVEDSSKVQTLLFSATLPIWVKQISSKFLKPDKKTADLVGNEKMKASTNVRHFVLPCSV
SARAQLIPDIIRCYSSGGRTIIFTETKDSASTLAGVLPGARALHGDIQQSTREVTLSAFR
SGKFSTLVATNVAARGLDIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGIAVMLYDPR
MSNFSRIERESGVKFERISAPQPSDIAKSAGVEAAEKINEISDSVIPVFKAAAEELLNSS
DLTPTDLLAKALANAAGYTEIKSRSLLTSLENHVTVLLECGKPIFSPSFAYGALRRFLPE
EKVESIKGLSLTADGKGAVFDVAAEDLDTFLAGQENAAGVSLEVVKILPNLQEREPSRGR
FNGGGGGRGFSDRRGGGRFSGGGGGRGRGSFSRGRGNRNSKW
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgttgttatggctgaagctcaatccgccgacaagaagaagatcatgaagaag
tccgaagttgcggagatggagctggttgaggagaagtccgctgagagaaagatcaaaaag
gagaaaaagtcgagcaaaaagaccaaactgacctcggagcctgacctcgatggttctaat
tccaatatctctgtcaaaattaaaaaagaaaagaagcggaaggctttggaaatcgacggc
gataatgaggaggagaagagcgataccagctcggagatgggtgagccgatgaacagcttg
gccaagaagaagaagaagatgaaatttgaggacggacacgaagaggaggaaaaagaggag
aaccccaatgctgtctccaatttccgaatttcggcgccgctcagggataacttgaaggcc
aagggtattgaggctctgttcccgattcaggcaatgacgtttgataccattcttgatggt
tccgatttggtgggacgggcccgcactggtcagggtaaaactttggcctttgtgttacct
atattggaatcgttgacaaatggtcctgcgaaagcgtcaaggaagactggatatggaaag
gcgcctagtgttcttgttcttttacccacaagggagttggccacacaggtggctgccgac
tttgaagtttatggtggagctctagggttgagttgctgttgcctgtatgggggttctcct
tatcaggcgcagcagaatcaattgaaaagaggtgttgacatagttgttggcacccctggt
cgcattaaggatcacatagagaggggaaatattgacttccgttccttaaagttccgagtg
cttgatgaggctgatgaaatgctgaggatgggttttgttgaggatgttgagcttatccta
ggcaaggtagaggattctagcaaagtgcaaactcttcttttcagtgccactttgccgatc
tgggttaagcaaatatcttccaaatttttgaaaccagacaagaaaactgctgaccttgtt
ggtaatgagaaaatgaaagccagcaccaatgtaaggcattttgttcttccctgctctgta
tctgcaagagctcagcttattcctgatatcattcgctgttatagcagtggtggtcgaact
attatcttcacagagactaaggattctgcttcgacacttgcgggtgtgcttcctggagca
cgtgcgttgcatggtgacatacaacagtctacccgtgaggtaactctttctgcgttcaga
tcgggcaaattttctacgcttgtggctactaatgtagcagcacgagggctagacattgat
gatgtccagttaattattcagtgcgagccacctcgtgatgtagaggcgtacattcatcgg
tctggaagaacaggaagagctgggaaaagtggcatcgctgtaatgctttatgatcctagg
atgtcaaatttttctaggatagaaagagaatcaggtgtgaaatttgaacgcataagtgct
ccacagccatctgatatagctaaatcagctggtgttgaagctgcagaaaaaatcaatgag
atttctgatagtgtgattccggtattcaaagctgctgctgaagagctactcaactcatct
gatttaaccccaacagacctacttgctaaggcattggccaatgctgctggttatactgaa
attaagagtcgatcacttctcacttcattggagaaccatgttactgtacttctcgagtgt
ggaaagcccatcttctcaccatcgtttgcttatggagctttgaggaggtttttacctgaa
gagaaggttgaatcaattaagggtctttcattgacagcagacggaaagggtgctgtattt
gatgtagctgccgaagatcttgatactttccttgcagggcaggagaatgctgctggtgtg
agcttggaagtggtgaaaattttaccaaatttgcaagaaagagagccatcaagaggaaga
tttaatggtggcggtggtggccgtggcttttcagataggagaggtggtggcaggttttct
ggtggtggtgggggaagaggtagaggatcattttctagaggtcgtggcaacagaaacagc
aaatggtga
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