Salvia miltiorrhiza (redroot sage): 130993606
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Entry
130993606 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130993606 isoform X1
KO
K19026
spatacsin
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smil03400
]
130993606
DNA repair and recombination proteins [BR:
smil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130993606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Type_III_YscG
FTP
Motif
Other DBs
NCBI-GeneID:
130993606
NCBI-ProteinID:
XP_057774527
LinkDB
All DBs
Position
1:54144109..54163838
Genome browser
AA seq
3195 aa
AA seq
DB search
MDLDSRPIEDGLPVLQLRKWGSSEFPYNPSSFREGFISPTRKSLLLLSYDSEALWFPLVK
AGRCINKKDSENSSDGTVADPLESSKPSISCSRESNSGSSDSIELDGKTGYASGDSFQGS
TGAFISDVDSVAWGLCGDTFDQHKEASFQELLFVSGKQGVVVHAFSKFGKFSGVIRPEQA
KDVGQGKWMEWGPSTTLSPNVECQEEEESHHKTSRKSTSHVQAPAEDGRSASPKIWMQTF
LTKVERVTSGGYIYTRFPKRPLLPNDVVVSFRIFDQESQFSDLQSPGVTASGNQTNPSMP
VVGHMISKPDTDFNSSVTTVLGDSISSLRSAVTSGSYKCTKVFSNNSYRLVGFSLVNISS
TPVDTSDLNDGNYIKTLVSVARTVSWGIQWLYTAKLDEKLDTGPFEWIDFSFSDRFLICL
STSGTISLYGATTGKYIASLNVLRTNGPGYSSSSWHCISSLTIKRKFKRLFVFPHSLLLG
VMDESGVIFVIPTDNHVHEDHFSFEDVLPYQYYSDLGLLMGWEVGGAEIGYQRVLSNTSE
AQGISRLAGHGRNSRFSGKENLIIENSHTKSHNGSYLMSFSNATQILNENKLMLSDFPSC
LIRKAFIPPSGCNEDDVICCSQFGVTRLIKRHSSEKRRFQVVHANLQLDFVVNDDINYVM
PAGETSSSEAVGCNFSGCLYLVTRRGLSVVLPSISATPNFFPVEAIGYCLPNYSSSVKYG
AGDLMELGRTKKSFSPWKVEVLDRVLQYEGLEVAEKLCLENGWELGISRIRHLQLALAYL
EFDEIENSLEMLMRVDMAVEGILRLLFAADYLMFNKVSNDNEVSAASRLLALATSYATRV
IRKYGLLHHKKVSEKPLEVTSNEGSYPLLELTDKEHDEEGTSRTLMETARYLVVIRSLQQ
QLNEKFRRPGQVLTVNAGLVNTVSTGLSEDESKIPAASEDALSLIRSDPRGTAAPASGTE
LSNAENLALMPVDTVGAEIQDFQSFDKAVLVSEGSTYGKRTSRIENPKDMIARWELDNMD
IKTVVKDALLSGRLPLAVLRLHLHHVNNLLPGTETRDTFNDVRIAGRAIAYDLFVKGEIG
LGITTLQKLGEDVETTLKQLVFGTVRRSVRVLVAEEMKRYKYLGPHELKILEMLSLVERV
YPCNSFFSTSATRRKGLNRVSNEEPLREISLDLLHPLFDHLVISCGEIDGVVLGSWTTID
KQSIAAEVDDDTTHAAYWAAAAAWSDAWDQRVVDRILLDQPLLMGVNVSWESQVEYHACH
NDWLEVSKLVEVVPPYALSPGSLSISLDGIHPASVIEYGQEPPEFNKYPSFLEELDSVCM
TVPNIRLFRFPTNRSSSVWLKRLMEQQLANKFIFLVDYWSSASDIVPLLAQSGFMIGIRD
NSFLDGANDSSSDSLLVIGDASIDPDAIQSLHKVVIHFCAQYNLLYLLDIYLDTHKLAID
HDSLTFLLDAAGDNEWVKFLLLMRVKGKEYDASFSNARAVAALNSVPGNKLTVETDDIIQ
AVDDIAEGAGEMAALATLMFAPAPLQECLSSGSVKRHCSSAQCTLENLRPALHRFPTLWN
TLVAACFGQDPACHNLTLKTKMSGYSDLLDYLNWREGVFFSSVRDTSILQMIPCWFPKSV
RRLIQLYVQGPVGWQSLADSETEELSLLRDIYYVVNSSGHAQISATSWEAVIQRHIEEEL
YASSLEGADVGLEHHLHRGRALAALNHLLSARVHKLKSDNNHWGQSESPSTGQTNVQSDV
QILLSPITESEESLLSSVIPLAIQHFDDSVLVASCAFLLELCGLSASTLRMDIAALRRIS
SFYKSAENNQYRQLSPRSPAFLQPPVEVDVTESIARALADDYLHKYSSSVMQKGDRNNSV
LNQPSRALLLVLQHLEKSSLPLSSNGMTCGSWLSSGNGNGADLRSQQKATSQHWQLVTAF
CQMHNIPLSTKYLAVLARDNDWVGFLSEVQVGKYPFETVIQVASKEFSDPRLKSHISTVL
RSMLSRKKTAPLNIDTGEKDITFLSNANLCMPVELFGIIAECERHERPGEALLLKAKNLS
WSILAMVASCFPDVSPLSCLTVWLEITAARETSAIKVNDIASQISKNVGAAVEATNTLST
TARARAITFRYNRKNAKRRRLQEPVPLDSLASADSIGSKSSTVSNTQGFLHEEEREKIGD
EDTKFRTDSNSMASTLSRMVAVLCEQRLFLPLLKAFEIFLPSCSLLPFIRALQAFSQMLL
SEASAHLGLFSTIIKEESPLTLPNWEREGKVGNSWTSSTAVKAADAILLTCPSPYEKRCL
LRLLAATDFGDGGSIASRYGQQSWKIDMAEPSLRSDECPLLGDETFDDASLLTALEKNGY
WEQARSWAKKLETSGESCWKSAANHVTEMQAAAMVAEWKEFLWDIPEERVALWSHCQTLF
IRYSFPALQAGQFFLKHAEAAEKDISARELHEILLLALQWLSGMITLSNPVYPPHLLREI
ETRVWLLAVESEALVKNEVEDSLISPTREPGAGKSSDLMDRTASIIAKMDNHMNGQRLKS
SEKNDRENGQTHVRMTQTGDGGGLKTKRRAKGFGSSRKPVSDSGDKKYEPESIPLNPRDE
THYHDESSKIDASLSRWEERVEPAELERAVLSLLDFGHITAARQLQNKLSPDSMPSEFFL
IDAALKLAALSTPCNKVSMSMLDNDVLSVMQAYNLRAEQRVIDPLQILESFASLLKEGSG
RGLCRRIISVVKAANVLGLTFSEAFEKQPIELLQLLSLKAQESFEEAHLLVQTHSMPAAS
TAQILAESFLKGLLAAHRGGYMDFQKDEGPAPLLWRISDFLKWAELCPSDSEIGHALMRL
VITGQEIPHACEVELLILSHHFYKLSACLDGVDVLVALAATRVEAYVWEGDFSCLARLIT
GVGNFHALNFILGILIENGQLDLLLQKYSAAADANSGTAEAVRGFRMAVLTSLKQFNPTD
LDAFAMVYNHFDMKHETAALLELRANQLSQQWFLRYDKDQNEELLDSMHYFIEAAEVHSS
IDAGNKTRKACAQASLVSLQIRMPDTKWLNLSETNARRILVEQSRFQEALIVAEAYGLNQ
PSEWALVLWEQMLNPELTEQFVAEFVAVLPLQPSMLAELARFYRSEMQARGDQSQFSVWL
TGGGLPADWAKYLGRSFRCLLRRTRDIRLKQHLAMSATGFNDIVETTNKELDKVPETAGP
LILRKGHGGAYLPLM
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgattcccgtccaattgaggatggtctcccagtactgcagttgaggaaatgg
ggctcctctgaatttccatacaacccttctagttttcgcgagggttttatttctccaacg
agaaagtcgttgttgttactttcttatgattctgaggcattatggtttcccttagttaaa
gcaggtcggtgtataaacaagaaagattctgaaaattcttctgatggaacagttgctgat
ccactagaatcaagtaagcccagtatatcatgctcaagggaaagcaactctggctcttct
gactctatagagttggatgggaagacgggctatgcatcaggagatagttttcaaggatct
actggtgcatttatatctgatgtagattcagtggcatggggtctatgtggggatacattt
gatcagcacaaggaggcttcattccaagagctactttttgtctctggaaaacaaggcgta
gtcgtacatgcgttttctaaatttggtaaatttagtggagtaataagacctgagcaagca
aaggatgttgggcaagggaagtggatggagtggggaccctcaacaaccttatctccgaat
gtcgagtgtcaggaagaagaggaatctcatcataagacctcccggaaaagtacttctcat
gtacaagcccctgctgaggatggtcggtcagctagtccaaagatatggatgcaaactttt
ttgaccaaagttgaaagagtaacatctggtggttacatttataccaggtttccaaagaga
ccattacttcctaacgatgtagttgtttctttcaggatatttgaccaggaatcacaattc
tcagacctccagtctcctggtgttacagcatcaggaaatcaaaccaatcccagcatgcca
gttgtgggacacatgatcagtaaaccagatacggattttaattcatcagtcacaacagtt
ttgggtgatagtatatctagcttgagaagtgctgtcactagtggttcgtataagtgcaca
aaagtgttctctaacaattcgtaccgtttagttggattttctctagtcaatattagttct
acgcctgttgataccagcgatttaaatgatggaaactacattaaaacactggtttcagtg
gccagaaccgtgagctggggaatacagtggctatatacagcaaagcttgacgaaaaacta
gatacaggcccatttgagtggatagacttcagtttttctgatagatttcttatttgtctc
agtacatctggcacaatctcattgtatggtgcaacgactggcaaatatatagcctcactc
aatgttttaaggactaatggacctggctattcttcaagctcttggcactgtattagtagt
cttaccatcaaaagaaagtttaaaagactctttgtatttcctcattccttattgttgggt
gtgatggatgaatctggtgtaatctttgttatacctactgataaccatgtccacgaggac
catttttcatttgaagatgtcctcccttatcaatactattcagatcttggacttttaatg
ggctgggaggtagggggtgctgagattggctaccaaagggtactttccaatacatcagag
gctcagggtattagtagattagcaggacatggtaggaattctcgtttcagtggtaaagag
aatctaataattgaaaatagtcatacaaagagtcacaatggctcgtatctcatgtccttt
tctaatgcaacccagatattgaatgagaataagttaatgctttctgattttccatcctgc
ctcataaggaaagcttttatacccccttctggatgcaatgaagatgatgttatttgttgt
tctcagtttggagttactcgccttattaagagacatagttccgagaagagacggtttcaa
gttgtgcatgccaatctacaattagattttgttgtcaatgatgacataaattatgtcatg
cctgctggggagacatcttctagtgaagctgttggctgcaatttcagtggatgcttatat
ttagtgacgagaagaggtctctcggttgttcttccctcgatttcagctaccccaaatttc
tttcctgttgaggcaattggatattgtttaccaaattattctagtagcgtaaagtacggg
gctggtgatcttatggaacttggtagaactaaaaaatccttctcaccttggaaagtggag
gttttggatagagttcttcaatacgaaggccttgaagttgcagaaaagttatgcttggaa
aatggctgggaattggggatttctcggatccgccacttgcagttggctttggcttatctt
gaatttgatgaaattgagaattctctggaaatgcttatgagggttgatatggcagtggaa
ggcatcttgaggttgctctttgctgctgactatttgatgttcaataaagtaagcaacgac
aatgaggtttctgctgcatcaaggcttctagcattggccaccagttatgcaactagggtc
atacgtaaatatggcctattgcatcataagaaagtgtccgagaagccattggaggttacc
agtaatgaaggttcttatcctctattggagttgactgataaagagcatgatgaagaggga
acttcaagaacccttatggaaacagcacgatatttggtggttattcggagtttgcagcag
caattgaatgaaaaattcagacgaccaggacaagtattgacggttaatgctgggttggtg
aatacggtcagtactggtctatcagaggatgaatccaagattcctgctgcttcagaagat
gctttatcgttgattagatcagatccacgtggaactgcagctcctgcctctggaactgaa
ttgagtaatgcagagaaccttgctctgatgcctgtcgatacagttggtgctgaaatccaa
gattttcagagctttgataaggcagtcctagtttctgaaggaagcacatatggaaaaaga
acttctagaatagagaatcctaaagatatgatagcacgctgggagttggataatatggac
attaaaactgttgtgaaagatgcattgctttctggtcgtcttcctctagccgtgcttaga
ttgcatcttcatcatgtgaacaatttgttacctggcacagaaactcgtgatacctttaat
gatgtccgcattgctggaagagcgattgcatatgatttatttgtaaagggtgagattggg
ctgggtataacgacactgcaaaagcttggggaggatgttgaaaccaccttgaaacagtta
gtttttggaactgtcagaagatctgtgcgggtgctagttgcagaagagatgaaaagatat
aaataccttgggccacatgaattgaagatattggaaatgttatcactagtagagagggtg
tatccttgtaatagtttcttcagtacgtcagctaccaggcgaaaggggcttaatagagta
tctaatgaagagccactcagggagataagtttggacctattgcatccactatttgaccat
cttgtcatttcatgtggagagattgatggagttgttttgggttcatggacgaccattgac
aaacagtctattgctgctgaagtagatgatgacaccacccatgctgcttattgggctgct
gctgcagcttggtcggatgcctgggatcaaagagttgttgaccgtatacttctggaccaa
cctcttcttatgggcgtcaatgtatcgtgggaatctcaagttgagtaccatgcatgccat
aatgactggttagaagtttccaagttagtagaggtagttccaccatatgcactatctcct
ggaagccttagcatcagcttggatggtatacatccagcttcagtcattgagtatggtcag
gagcctcctgaattcaacaaatacccaagtttccttgaagagttggacagtgtatgcatg
actgtgccaaacatcagacttttcaggtttcctacaaacaggtcatcttctgtgtggcta
aaaaggcttatggagcagcagcttgcaaacaaatttatctttttggtggattactggagc
agtgcatcagatattgtacctttgctggcccagtcaggtttcatgattggcatacgtgac
aattcttttctggatggagcaaatgatagttcatctgattcgctattggttattggtgat
gcatctattgatccagatgcaatccaatctctacataaagttgttatacacttctgcgcc
cagtataacttactgtacctcctggacatttatcttgacactcacaaactggctattgac
catgattccctcacctttttattggacgcagcaggtgataatgagtgggtaaagttcttg
ctcttgatgagggttaaaggaaaagaatatgatgcatcattttcgaatgctcgtgcagtt
gctgccctaaattcagttccaggcaataaacttactgtggagacggatgacatcatccaa
gctgttgatgacattgcagaaggagcaggggaaatggctgctttagccacattgatgttt
gctcctgctcctctacaagaatgccttagtagtggcagtgtaaaaaggcactgtagttcc
gctcaatgcaccttggagaaccttagaccagctcttcatcggttccctacattgtggaac
acccttgtggcagcatgttttggtcaagatcctgcttgccacaatttgactcttaagaca
aaaatgtcaggatattctgatttgttagactacttgaactggagggagggtgtattcttc
tcttctgtacgggacacttcaattcttcagatgatcccgtgctggttccctaagtcagta
cggagattgattcagctctatgtgcagggcccagttggctggcaatcattagctgattca
gagactgaagaactttctcttctgagagacatctattacgttgtaaattcaagtggtcat
gctcagattagcgccacatcctgggaagctgtcatccagagacatatagaagaggaactc
tatgcatcttctttagagggagctgatgttggacttgaacaccatttgcatcgtggacgt
gcattggctgctttaaatcatctcctttcagcaagggtccataagttgaaatctgataat
aatcattgggggcaatctgaatctccatcaactggccaaacaaatgtacaatcggatgtg
cagatcctcctttcaccaataactgagagtgaagagtctcttctctcatctgttataccc
cttgctattcagcattttgatgactctgtattggtggcttcatgcgcttttcttttggaa
ttatgtggtttatctgctagtaccctccgaatggatattgctgccttgagaagaatatct
tctttctacaagtctgcagagaacaatcagtacaggcaactatctcctaggagccctgct
tttcttcagccacctgttgaagttgatgtaacagaatctatagctagagcactggcagat
gattatcttcataaatattctagtagtgtaatgcagaaaggtgacagaaacaatagcgtt
ttgaatcaaccgtcacgagctttattgcttgttcttcagcacttggaaaagtcaagtctt
ccattgtcatccaatggcatgacctgtgggtcttggttgtcaagtggaaatggaaatgga
gctgacttaaggtctcaacaaaaagccacaagtcagcactggcaattggtcacagccttt
tgtcagatgcataatattcctttaagcactaaatatcttgctgtattagcaagggataat
gattgggttggctttttgtccgaagttcaagttggaaaatatccttttgaaacagtaatc
caagtggcatcaaaggagttcagtgacccccgtttaaagtctcacatttcaacagttttg
cgaagcatgctgtctaggaaaaaaactgctccattgaatatagatactggagaaaaggac
ataacttttctgtcaaatgcgaatctttgcatgcctgttgaattatttggaattatagct
gaatgtgagagacatgaaagacctggagaggctcttctcctgaaagcaaaaaacttaagc
tggtctattttggctatggttgcttcttgctttcctgatgtttccccgttgtcctgcctg
actgtttggctggaaataactgcagcaagggagacttctgccatcaaagttaatgacatt
gcatctcaaatttcaaaaaatgttggagcagctgttgaggctactaacaccctttccact
actgctagagctagagccataacatttcgttataataggaaaaacgcaaagcgtaggcgc
cttcaggaacctgttccactggattctttggcttcagcagattctataggttctaaaagc
tccactgtttctaatactcaaggttttctccatgaagaggaaagggagaaaataggtgat
gaagataccaagttccggactgactctaatagcatggctagcaccttgtcaagaatggta
gctgtgctttgtgagcagcgcctgttccttcctctgctaaaagcttttgaaatatttcta
ccttcttgctcgctgttacctttcattcgtgctcttcaggctttctcacaaatgctcctc
tcagaggcttcagcacatcttggattattttcaaccataattaaggaagagtctcctctt
acactacctaattgggaaagagaagggaaagttgggaactcatggacgagttccaccgct
gtcaaagctgctgatgctattcttttaacttgcccatctccatacgaaaaaagatgcttg
ctaaggctccttgctgctactgactttggtgatggagggtctattgcctcacgatatggg
caacagtcttggaaaatagatatggctgaaccctctctgcggagtgatgaatgccccctc
ctaggagatgaaacatttgatgacgcttcacttctaactgcattggaaaagaatgggtat
tgggaacaagcacgcagttgggccaagaagttggagactagtggtgaatcatgttggaaa
tctgcagctaatcatgtaactgaaatgcaggctgcagccatggttgcagaatggaaggaa
tttctttgggatatcccagaagagagggttgctttatggagccactgccagacgctcttc
atcagatattccttcccagcattgcaggctggacagttcttcctaaaacacgctgaagca
gcagaaaaggatatttcagcaagagaacttcatgagattttgctacttgctctgcagtgg
ctgagtggaatgataactttgtcaaacccagtttatccaccacaccttttacgcgaaatt
gagaccagagtgtggctcttagctgtggaatcggaagctctggtaaagaatgaagttgaa
gattcactaatttcacccacccgggagcctggagctggcaagagttctgacttaatggat
cgcacagcaagcattattgctaaaatggacaatcatatgaatggacagaggctcaaatct
tctgagaagaatgatagagaaaatggtcagactcatgttaggatgactcaaactggtgat
ggagggggcttaaagacaaaaaggagagcgaaaggctttggatcatcaagaaaacctgtc
tctgattcaggagataagaagtacgagcctgaatctatacctctcaacccgagagatgag
acacattatcatgatgaaagctcaaaaattgatgcctcattatcgaggtgggaggaaaga
gttgaacctgctgagctcgaaagagctgttctttcactgttggactttggacacataaca
gctgctagacaactgcagaataaactttctccagacagcatgccatctgaattttttctt
attgatgcggctttgaagcttgctgctctttcaactccatgcaacaaggtgtcaatgtca
atgctggacaatgatgtactctctgttatgcaggcatacaatcttcgcgctgagcagcga
gtgattgatcccctgcagatcttggagagtttcgcaagtcttcttaaggagggtagtgga
cgtggactatgcaggaggataatctctgttgtgaaagctgcaaatgtgcttggtctaaca
ttttcagaggcattcgagaaacagccaatagagctgctgcaattgctttcgctcaaagcg
caagagtcttttgaggaagcccatcttctagttcaaacacactcaatgccagctgctagt
actgcccaaattctcgccgaatcttttctaaagggtctattagcagcacatcgtgggggt
tacatggattttcagaaggatgaaggacctgctccactgctatggagaatttcagatttc
cttaaatgggctgagctttgtccttctgattcagaaattggccatgcattgatgagatta
gtaatcacagggcaagaaataccccacgcatgcgaggttgagcttcttattctatctcat
cacttctataagttgtcagcatgccttgatggagttgatgtgctcgtagctcttgctgca
accagggtagaagcttatgtctgggagggtgatttctcgtgtcttgctcgcttgataaca
ggagttggaaacttccatgcactcaatttcatacttgggattctgattgaaaatggccaa
ctggatctcctccttcagaaatattcagcagctgccgatgctaatagtggaactgctgag
gcggtcagaggattccgaatggctgttctgacatcactcaagcagtttaatccaactgat
ctcgatgcgtttgcgatggtctataatcactttgacatgaagcatgaaaccgctgcactt
ttggagttacgtgcaaatcaattgtctcagcaatggtttcttcgttacgacaaggatcaa
aatgaagagctccttgactcaatgcattatttcattgaggctgcagaagtgcactcgtcc
attgacgctggcaacaaaactcgcaaagcttgtgctcaggcatcacttgtatcgctgcag
atacgaatgccggatacaaaatggctcaatctttctgaaactaatgcgcggagaatatta
gttgaacaatctcggtttcaggaggccttaatcgtcgctgaagcctacggcctcaaccag
ccaagtgagtgggctctggttctctgggaacagatgctcaaccccgagctcactgagcag
tttgtagccgagtttgtcgctgtattacctctccagccatcaatgctagctgaacttgca
aggttttaccggtctgagatgcaagcccgcggagaccagtcccagttctcggtatggctc
actggaggaggcttgcctgcagattgggcaaagtatcttggtagatctttcagatgcttg
ctgaggaggactagagacatcaggttaaaacaacatttggccatgtcagccactggattc
aatgacatagtcgaaacaaccaacaaggaactggataaggtccctgaaactgctggaccc
cttatcctgaggaaaggacacggaggggcgtacctccctctgatgtag
DBGET
integrated database retrieval system
