Salvia miltiorrhiza (redroot sage): 130993654
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Entry
130993654 CDS
T09291
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130993654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130993654
Spliceosome [BR:
smil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130993654
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF4200
Motif
Other DBs
NCBI-GeneID:
130993654
NCBI-ProteinID:
XP_057774618
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Position
7:complement(24724410..24728713)
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AA seq
482 aa
AA seq
DB search
MATLNDSFLADLDELSDNEDDLLEAENDNAEHMEEDIDGDLADIEALNYDDLDSVSKLQK
TQRYTDIMQKVEDALEKGSENSSHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLIGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLLASK
STLAARVDSTRGDPTGKTGRTLRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPRKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSRLAA
KVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQANQFGGTQSTYFSETGTFSKIK
RT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttaatgactcttttcttgctgatcttgatgaactgtctgataatgaagat
gatcttctggaagcagaaaatgacaatgctgagcacatggaagaagatatagatggtgat
ttagctgatatagaagcacttaactatgacgatcttgacagtgtgtccaaactacaaaaa
actcagcggtatactgacatcatgcagaaagttgaagatgcattggaaaaggggtctgag
aactcaagtcatggaattgttttggaagatgatccagagtatcagttgatagttgattgc
aatgccttgtctgttgatattgaaaatgaaattgtgataattcacaattttatccgcgac
aagtaccgtttgaaatttccagaacttgaatcacttgttcatcatccaattgattatgct
cgggttgttaaaaagattgctaatgaaatggatctgacgcttgttgatcttgaaggactt
ttaccatctgccattattatggtcgtttctgtaacagcatcaactactagtggcaagcct
cttccggaggatgtcttgcaaaagacaattgatgcatgtgatcgcgctcttgctctagat
tctgcaaagaaaaaggtccttgattttgtggagagtcgaatggggtatattgctccaaat
ctctcagctatagttggaagtgctgtcgctgcaaaactaattggtacagctggtggtctt
tcagcattagcaaaaatgcctgcatgtaatgttcagcttcttggtgcgaaaaagaagaat
ttagcaggcttttccacagcgacatcccaatttcgtgttggttatttggagcaaactgag
attttccagagtactccaccttccttaagaatgcgtgcttgtcgacttttggcttcaaaa
tccactctcgccgcacgtgtagattccactaggggagacccaactggaaaaactgggaga
actttacgtgcagagattcacaaaaagatagagaagtggcaagagcctcctcctgctaag
cagcctaaaccacttccagttcctgattcagagcctagaaagaagagaggtggtcggcga
ttaaggaagatgaaagaaagatatgctattacagacatgcggaagcttgcaaacaggatg
cagtttggaattccagaggagagctcactaggtgatggacttggtgaaggatatggaatg
ctcggtcaggctggtagtggaaagcttcgtgtatctgttggacagagcagacttgctgct
aaagtggctaagaagtttaaggaaaagagttatggaagcagtggcgcaacttctggactg
acctcaagtctggctttcacacccgtgcagggaattgagctttcaaatcctcaggcaaac
cagtttggaggaactcagagtacttatttttcggagactggaacgttttcgaagatcaag
agaacgtaa
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