Salvia miltiorrhiza (redroot sage): 130993723
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Entry
130993723 CDS
T09291
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic isoform X1
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130993723
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130993723
Spliceosome [BR:
smil03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130993723
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Gene cluster
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
nSTAND3
PhoH
Motif
Other DBs
NCBI-GeneID:
130993723
NCBI-ProteinID:
XP_057774741
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All DBs
Position
7:25755404..25763687
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AA seq
1190 aa
AA seq
DB search
MKASSIHSLLSPTPSPSPFTANTTNKLSPLPLFRPHLRLRFQYLQLFNSNRHSRFAAPHK
FPNPVFPVGSSSQLSDDDIEVESDDEEEEDDVAADEYDVVAGEIGGDSEQDEEDDEVPEA
SGGVGGGLPRYEEFKWQRVERIRNEVREFGEEIIDVEELASVYDFRIDKFQRLAIQALLK
GSSVVVSAPTSSGKTLIAEAAAVATIARGRRLFYTTPLKALSNQKFRDFRETFGDANVGL
LTGDSAVNKDAQILIMTTEILRNMLYRSVGTDSSESMLSDVDVIVLDEVHYLSDISRGTV
WEEIVIYCPKQVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTAL
LPLLDQKGTGMNRRLSLNQLQLDSSRDNVYKDENPRRRKSKKYQFDVPPLTKHDMNSIRR
SQVPQVIDTLWHLKARDMLPAVWFIFSRKGCDAAVQYLEDCNLLDECEITEVELALKKFR
VKYPDAVRESSAKGLLRGVAAHHAGCLPLWKSFIEELFQKGLVKVVFATETLAAGINMPA
RTAVISSLTKRIDSGRTFLSSNELLQMAGRAGRRGIDERGHVVLLQTPYEGAEECCKVLF
SGLEPLVSQFTASYGMVLNLLAGAKFTRSSAESDDSNTSQSGRTLEEARKLVEQSFGNYV
GSNVMLAAKEELSRIQTEIQMLASEITDEAIDKKSRKLLSHTSYKEIADLQEELRVEKRT
RSELRKRVEWERIFSFKPLLEDLGNEHLPFMCLQHTDADGALHQIPAVYLGKVDSLETLK
LKNMVHESDSFALTNGSNSSDTESEHAAEPSYYVALGSDNSWYLFTEKWIRTIYKTGFPN
VALALDDALPREIMANLLDKREMQWQKVAESEFGGLWCMEGSLETWSWSLNVPVLSSLSD
DDEVLKFSEAYKNAVQCYKDQRNKVSRLKKKIARTEGFREYKKILDTAKFNEEKIRRLKA
RSLRLATRIEQIEPSGWKEFLQISNVIHEVRALDINSHFIFPLGETAGAIRGENELWLAM
VLRNKVLVDLKPAQLAAVCGGLVSEGIKVRPWKNNSYIYEASSTVMNVLGFLDELKSSLL
DVQEKHGVKIPCCLDSQFAGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLLAQVN
PLFPLLEYEELFLTAWLQVPKLPDIDPRLKSNAVKASSVMDRPPISELVG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatcctccattcactctcttctctcccccacaccttctccatctcccttcaca
gcaaacactaccaacaaactctctccactgcctctcttcagacctcatctccgcctccgc
ttccaatacctgcaattattcaattccaaccggcactcgcgcttcgcagctccccacaaa
ttcccgaatccagtgttccccgtcggttcgtcttctcaactctccgacgatgatatcgaa
gtggaatccgacgatgaagaagaagaggacgacgtggcggcggatgagtacgacgtcgtt
gctggtgagatagggggcgacagcgaacaagacgaagaggacgacgaggttccggaggcg
agtggcggtgttggcggtggcctgccgaggtatgaggagttcaagtggcagagagtggag
aggattaggaatgaggtgcgggagtttggtgaggagatcattgatgtcgaggagctggct
tccgtttacgacttcagaattgataagttccagcgattggccattcaagcattattgaaa
ggttcttcagttgtagtttctgcaccaactagtagcggaaaaacattgattgctgaagca
gctgcagttgctactattgcccgaggaaggagattgttttacaccactcctttgaaagcc
ttgtcaaatcagaagtttcgtgatttccgtgagacatttggtgatgctaatgttggactc
ctcactggagattctgctgtcaataaagatgctcaaattttgataatgaccacagagatt
ttgcgcaacatgctatatcggagtgttggaactgattcttctgaaagtatgctttccgat
gtggatgtgattgttttggatgaagtgcattatttgagcgatatatcccggggtacagtt
tgggaggagattgtaatttactgccccaaacaagtgcaattaatctgtctttctgccact
gtcgcaaacccagatgagttggcgggttggattggtcagattcatggaaaaactgagttg
gtaacatcatctaagcgtccagttccgttgacttggcacttctcaacaaagacagcattg
ttaccacttcttgatcagaaaggcactggcatgaacaggaggctgtctctcaaccagtta
cagcttgattcgtcaagagataatgtatacaaggatgagaatcctagaagaaggaaatca
aagaaatatcagtttgatgtgcctccacttacaaagcatgacatgaactctattcgtcgg
tctcaggttcctcaagttatagatacattatggcatctaaaagcaagagatatgcttcca
gcagtctggttcatctttagcagaaaaggttgtgatgctgctgttcaatatcttgaagac
tgcaatctattggatgaatgtgagataactgaagtagagcttgcacttaaaaagtttcgt
gttaaatatcctgatgctgtgagggaatcttctgcaaaaggccttcttcgaggtgttgct
gcccatcatgctggttgccttcccctctggaaatcgttcattgaggagcttttccaaaag
gggcttgtgaaggttgtttttgccacagagactcttgctgcgggaatcaacatgcctgcg
agaactgctgttatttcatctctgaccaaaaggattgacagtggccgcacatttttaagt
tccaatgagctgctacaaatggcaggacgtgctggccgtagaggcattgatgaaaggggt
catgtcgttcttcttcaaacaccatatgaaggagctgaagaatgctgcaaagttctcttt
tctggactagaacctcttgtttcacagtttacagcttcatatgggatggtgcttaatcta
cttgcgggggcaaaatttacacgtagctcggctgaatctgatgactcgaatacctcacaa
tctggacggacattggaagaagcaaggaagttggttgaacaaagtttcggaaattatgtg
ggaagcaatgttatgcttgctgctaaggaggagctctctaggatacagactgagatacag
atgctggcgtcagaaattactgatgaagctatcgataagaagagtcgaaaattgttgtca
catacatcttacaaagaaattgccgatctgcaagaagaattgagggtagagaaacgtact
cggtctgaacttcggaaaagagtggaatgggagagaattttttctttcaagcccctactc
gaggatcttggaaatgaacacctaccttttatgtgtctgcagcatactgatgcagacggt
gctctgcatcaaattcctgctgtttatttggggaaggttgattctttggagactttaaaa
ttgaaaaatatggttcatgaatctgattcttttgcgctaactaatggaagtaattcaagt
gatacagagtctgaacatgctgctgaaccatcgtattatgtagcccttggttcggataac
tcttggtaccttttcactgagaagtggatcagaaccatctataaaactggattccctaat
gttgccttggctctagatgatgctttacctcgtgaaataatggcaaatctgcttgataag
agagaaatgcagtggcaaaaggttgcagaatcagaatttggtggtctatggtgcatggaa
ggatctcttgagacgtggtcgtggagtttaaatgtgccagtcttgagtagtctttctgat
gatgatgaggttttgaagttctctgaagcatacaaaaatgctgtccaatgctacaaggac
caaagaaacaaagtttcacgtttgaagaaaaagatagcacgtacagaaggcttcagagaa
tataagaagattttagatacggccaagtttaacgaagagaaaatacgaagattgaaggct
agatcacttcgtttggctactagaatagagcagatagaaccatctggctggaaggaattt
cttcagatcagcaatgtcatacatgaagtcagggcattggatatcaactcacactttata
tttcccctgggtgaaaccgctggtgcaattcgtggggagaatgaactctggttagcaatg
gttcttcggaataaagtcctcgttgatttgaaacccgcacagcttgctgcggtttgtgga
ggtttagtgtctgaaggaatcaaagttcgaccgtggaaaaataatagctatatatatgaa
gcttcgagcactgttatgaatgtgctgggttttttggatgaactgaagagctcactttta
gatgtccaggaaaagcatggagtgaagattccttgctgcttggatagccagtttgccgga
atggttgaagcgtgggcttctggcctaacatggagagagattatgatggattgtgcgatg
gatgaaggagatctagcacggcttttacgacgaacaattgatctattagcacaggtaaat
cctctctttccattgctagaatatgaagagctctttttgactgcttggttgcaggtacct
aaattgcctgatattgacccacgcctcaaaagtaatgcggtgaaagcttcgagcgtcatg
gatcgtccacccattagtgaattggtgggataa
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