Salvia miltiorrhiza (redroot sage): 130994826
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Entry
130994826 CDS
T09291
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130994826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smil03019
]
130994826
03036 Chromosome and associated proteins [BR:
smil03036
]
130994826
Messenger RNA biogenesis [BR:
smil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130994826
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130994826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Antimicrobial10
Motif
Other DBs
NCBI-GeneID:
130994826
NCBI-ProteinID:
XP_057775885
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Position
7:complement(54301159..54307683)
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AA seq
706 aa
AA seq
DB search
MPGVTSDSGESNSLSIVPHSLEAQAPIVYPLRAHCAAPPFGRVSISWARGNTLRVSLLQS
GGAESGGEVVEVNLTNAEGGEIPEAERLRIACGSVTPFAVLQSRKNPIDKLQYDKTWWVH
VMEYSKEIKSLLGNSKSYVAPTIEDPKTLLKKVEEPTSLKAAWELMELFYADKQSQTWIP
ERLLDWLADYDCLLSATQPTVHAGLVSFQKGLVTIQAVENDPEYWEVMSSALGVGWLDIV
VKMLRLHGSFQLDQLASREIESGLVEAVAILISQMPRLRPHISEDKLGECYNTKPEFMKA
WEKWRTQITKLDCHPYWLQCDHKQTRVGLKNMIQIMLGNASVLSHVTYHWIELYISHLLY
IRPFTVGLESMYNLAQKCMHLKPITNRHKLMGLLIGILEENTEVVLAECSRSFGPWMITH
AVELLIAGSNQAEMLLHEEQSKIGGICIEELHRLIYAQILSSHALTWNIAPIYLTSCMKQ
GLGLLENLLYKQPVQHHQVLSKSIEICRLNRVDYVSHHMMKIAGVYYWKHGNKGSAVFWL
QQAQDEVRLNRIAKHLFDFVGKSVSDESFKQWEGMIELLGSESKTAGGLEFLKKYRDFRR
SLQQVQDGITTDDARKAAEALVALMRNPSTPQQFWLPLLYDSLRLLNWKDRPLLNVSHTN
LLLNKLQELSSARLLPGYVDAALPPEAFKSVRLALATNLGRAILEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagtgacatcagattccggcgagtccaactctctctccattgttccccactcc
ttggaggcgcaagcgccgatagtctatcctctgcgagcgcactgcgccgccccgccgttc
ggccgcgtctctatctcctgggcgcgtggtaacacgctccgcgtctcgctcctgcaatcc
ggaggagctgaatccggtggggaagtcgtggaagtgaatctcaccaatgcggaaggcgga
gaaatccccgaagctgagcggctgagaattgcgtgcggctcggtcacgcccttcgcggtt
ctccagagccggaaaaatccgattgacaagctgcagtatgacaaaacttggtgggtacac
gtaatggagtacagcaaggaaataaaatctctcctcgggaattcaaagtcatatgttgct
ccaaccattgaagatccgaagacattattgaagaaagttgaggaaccaacctcattgaaa
gctgcctgggagctgatggaactgttttatgcggacaagcaatctcagacctggatccct
gaacgccttcttgattggttagctgattacgattgtttgctatctgcaactcagccaact
gtccatgcgggacttgtgtctttccagaaaggacttgtaactatacaggcagttgagaac
gatccagagtattgggaagttatgtcatctgccttaggagttggctggctggatattgtt
gtaaaaatgttgcggttgcatggatcttttcagttggaccagcttgcaagtcgagagata
gagagtgggctagttgaagcagttgctattcttatatcacagatgccacgactgcgtcct
catatatcagaagataaattaggagaatgctacaacaccaagcctgagtttatgaaagca
tgggagaagtggcgaactcaaattactaaactggattgccatccttattggcttcaatgt
gatcataaacagaccagagttggacttaaaaatatgattcagataatgttgggaaatgct
agtgttctctcccatgtgacatatcactggatagagctttacatttcccaccttttgtac
attaggcctttcactgtgggtttagaaagcatgtataacctagctcagaaatgcatgcat
ttaaaaccaattaccaatcgacataagttgatgggactcctaattgggattctagaagaa
aacacagaggttgttcttgctgaatgctcaagatcatttggcccctggatgataacccat
gctgtagagctgctgatagctggaagcaatcaagcagaaatgcttttgcatgaagagcag
tctaagattggaggaatctgcatagaagagcttcatcgactgatttatgctcaaattcta
tcttctcatgccttgacttggaatattgctcctatatatttgacttcatgtatgaagcaa
ggtctgggcttgttggaaaacttattgtacaagcaacctgtacagcatcatcaagtgtta
tcgaagagcatagagatctgtcgtctcaatcgagttgattatgttagtcaccatatgatg
aagatagccggagtttattactggaaacatggaaataaaggttcagctgtgttctggctg
cagcaagctcaagatgaagttcgtttaaaccgaattgccaagcatttgtttgattttgtt
ggaaaatcagtttctgatgaaagtttcaagcaatgggaaggaatgattgaattgctggga
tctgagtctaaaactgctgggggtctcgagttcttgaaaaagtatagggatttcaggcga
tcccttcagcaagttcaggacggaatcaccactgatgatgctagaaaagctgcagaagcg
ctcgtagctctcatgaggaacccttctacacctcagcagttttggctgcctctgctatac
gactcattgagattgctgaactggaaggatcgtccgttgctcaacgtttctcacactaac
cttttgttgaataagctgcaagagttgtcgtctgcacgacttctgccaggctacgtcgat
gctgccttgccgccggaggccttcaagtctgtccggctggctcttgctaccaatcttggc
cgcgccatccttgaagagtaa
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