Salvia miltiorrhiza (redroot sage): 130995313
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Entry
130995313 CDS
T09291
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130995313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130995313
Spliceosome [BR:
smil03041
]
Complex A
U1 snRNP components
U1 related factors
130995313
Complex B
130995313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
130995313
NCBI-ProteinID:
XP_057776533
LinkDB
All DBs
Position
7:13406867..13423779
Genome browser
AA seq
1022 aa
AA seq
DB search
MTSNPPPSGSQSHWPHPASGSTAPQSFAPPYPMQFRPASQASQGQPFMSPQTTPQFHPSG
QPQNMGIPPGQGQPLQFSQPMQQFMSRPPQGGHGAPSSYPQSMPMPSGMAQAQSTAPGQG
VPFSSPYTYAPSSFGLPQTGISMPPQFQASSQMSMPVGSTGAQPWMHSNQGTPIVAPLQQ
GSLQSFPTTTTVPAVNGSSTAQQSASDWQEYDAADGRRYYYNKTTKQSSWEKPLELMTPL
ERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLARELAEKAAAEASRPEMNSSS
ALPTASGASGEQPPATDNLASSTTSTGAGVSLSPVPVAPVASDAKSPILMASESRVVPVV
QTPVASATGVSVGDAVVSSPSDVSVKLSSARLMPMISLENPSAQVGSSPSVGASVPDGEE
EKKETAVAGKMNVAPVEEKTVDDEPVIYATKQEAKNAFKALLESANVEADWTWDQAMRVI
INDKRYGALKTLGERKQAFNEYLMQRKKIEAEERRLRQRKAKEEFMKMLEESEELTSSTR
WSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLQKKEKAKAQDEIRRNRLEFRQFLESC
DYIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLEKEEEEQKKRQKEQLRRAE
RKNRDAFRKMMEEHIAAGTITAKTSWRDYCQKVKDSEAYEAVASNTTGSTPKDLFEDLTE
ELEKKYDEDKAQVKDVLKQEKITVASTWTFEDFKSSFGDNTVLSSISDINLQLVFEDLID
RAKEKEEKEVKKRKRLAKDFTEKLSTIKELNVLSSWEECKPLIEESSEYRSMGEDLCREV
FDEFISRLQEKVKEKERKREEEKTKKEKEREEKEKRKDKERKEKERDKEKDKEKDKDRDR
EREKEKGKDISRKDEETENVDSMETHGYKDDKKREKDKEKKHRKRHQSTTDDVSSDKDEK
EETKKSRRHGSDRKKSRKHAYSPESDSESRHKRHRKDHRDGSKRSGHEELEDGELGEDGE
IQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaacccgccaccatccggttcacagtcacattggccacatcctgcatctgga
tccacggctcctcagagttttgctcctccatatcctatgcaattccgtcctgcctcacag
gcttcacaaggccaaccttttatgtctccacaaactactccacagtttcatccatcagga
caaccacaaaatatggggatacctccaggtcaaggtcaaccacttcaattttctcaacca
atgcaacagtttatgtcacggcctccgcaaggtggccacggtgccccatcctcatatcct
caaagtatgcctatgccatcaggcatggcacaggctcaatcaactgctccaggccaggga
gttccattttcatcaccatatacttatgctccatcttcttttggcttgccccagacaggc
atcagcatgcctccccagttccaagcttcctcccaaatgtctatgcccgttggttctact
ggggcacaaccgtggatgcactcaaatcaaggtactccaattgttgcaccattgcagcaa
ggcagcttgcaatccttccccaccaccacaactgtaccagctgttaatggttctagtact
gctcaacagtctgcttctgattggcaagaatacgatgctgctgatggcaggaggtattat
tacaacaagactacaaagcagtctagttgggagaagcctcttgagttgatgactcctcta
gagagagctgatgcatcaactgtttggaaggaattcactactcctgagggtagaaagtat
tattacaacaaggagacaaagcaatcaaaatggacgatacccgatgaattaaagttggct
cgtgaactggctgaaaaagctgctgctgaggcatcacgtccggaaatgaattctagctct
gcactacccacagctagtggcgcttctggtgaacaaccacctgctacagacaacttggca
agctccactacatcaacaggagctggagtcagtttgagtcctgtcccagtggctccagtt
gcttctgatgctaaatctcctattttgatggcctctgaatcaagagtggttcctgtagtg
cagacacctgttgcaagtgcaactggagtgtcagtgggagacgctgtggtttcctcccct
tctgatgtttcagtcaaattgtcaagtgccaggttaatgccaatgatcagcttggaaaat
ccttcagcacaagtggggtcaagtccctcggtcggggcttcagtcccagatggagaggag
gagaagaaagaaactgctgttgcagggaaaatgaatgtggcaccagttgaagagaaaaca
gtggatgatgaacctgtcatatatgctaccaagcaggaggccaaaaatgcgtttaaagca
ctattagagtctgcaaatgtggaggcggattggacttgggaccaggctatgagggtgatt
attaatgacaaaagatatggtgctctgaaaactcttggcgaaagaaagcaagcattcaat
gagtacttaatgcaacggaaaaagatagaggcggaggagagacgtctcaggcaaagaaaa
gcaaaggaggagtttatgaagatgttggaagaatccgaagaactcacatcatctacacga
tggagcaaagcagtgacaatgtttgaagatgataaacggttcaaggctgttgacctagaa
gtggatcgagaggatctctttaggaactatttggtggaccttcagaaaaaggagaaggca
aaggctcaggacgagattcgtcggaacaggctggaatttaggcaatttctggaatcatgt
gattacataaaggtggatagccagtggcggaaggttcaagatcttctggaagatgatgaa
cggtgtacacgcctagataaaatagaccggctcgacatttttcaggattatattcgtgat
ttggagaaggaggaggaagagcagaaaaagagacaaaaggaacaattaagacgagcggag
cgtaaaaaccgtgatgcatttcgtaagatgatggaagagcatattgctgctggcactatt
actgcaaaaacttcctggcgggattattgtcaaaaagtcaaggattctgaagcttatgag
gcagttgcatcaaacactactggttccacccccaaagatttgtttgaggatctaacagaa
gaattggagaaaaagtacgatgaagacaaagcccaagtaaaggatgttttgaagcaggaa
aagataacagttgcttcaacgtggacatttgaagactttaagtcctcttttggagataac
actgttttgtcctccatatctgacataaatttgcagctagtattcgaagatcttattgat
cgtgctaaagagaaagaagagaaagaggttaaaaagcgtaaacgtctagccaaagatttc
actgaaaaattgagcaccattaaggaattaaatgtgctttcttcgtgggaggaatgcaaa
ccacttattgaggaaagctcagagtacaggtccatgggagaagacctctgcagagaagtg
tttgatgaatttatatctcgtttgcaagagaaagtgaaggaaaaggagcgcaaacgagag
gaagaaaagacgaaaaaggagaaagagcgagaggagaaagagaagagaaaagataaagaa
agaaaggagaaagagagggacaaagagaaggataaagagaaagataaagatagggatcgt
gaaagagaaaaggagaagggaaaagatatttcaagaaaggatgaagagactgaaaatgtg
gattccatggaaactcatggatacaaagatgacaaaaagcgggagaaggacaaagagaag
aaacatcggaagcggcaccagagcacaactgatgatgtgagttccgataaagatgagaaa
gaggagacaaagaagtcacgcaggcatggcagtgaccgtaaaaagtcaagaaagcatgca
tattcacccgaatcagatagcgaaagcaggcataaaagacacagaaaagatcaccgtgat
ggatctaaacggagtggtcatgaggagctggaagatggcgaacttggtgaggatggggag
atccaatag
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