Salvia miltiorrhiza (redroot sage): 130995318
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Entry
130995318 CDS
T09291
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130995318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
130995318
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130995318
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
WDR90_beta-prop_4th
PQQ_3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Pep3_Vps18
WDR54
Motif
Other DBs
NCBI-GeneID:
130995318
NCBI-ProteinID:
XP_057776544
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Position
7:13527767..13534259
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AA seq
818 aa
AA seq
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MLKVHRINSVEWNPSPVVALATSADSSQVAAARADGSLEIWLVSPGSVGWHCQLTIHGDP
NSRVSSLVWCQSGPRGGPLGRLLSSSIDGSISEWDLFDLKQKEVLGSIGVSIWQIAAEPC
NDLHQNGRQETKSYQNGHTSPSITSDVDDEENSESEDENDNKHAVLVHEQNDAESTRLAA
ACDDGCVRIYSVSDAEELIYNRTLPRVSGRTLSVTWSSDGNRIYSGSSDGFIRCWDVKLA
REIYRITVGHGCLAGGNDLCIWSLLALRCGTIASGDSSGSVKFWDGQFGTLLHAHSNHKG
DVNALTAAPSHNRVFSAGSDGQIVLYKLSTEAVDSGDEKFVPAIKKWIYVGYVRAHTHDV
RALTLAVPISHEDLPPDEKVKRSRGPDKPLDFSYHKWAHLGVPMLISAGDDTKLFAYSVK
EFTKFSPHDICPAPQRMPMQLVLKTLFNQTPLLLIQSAHFLDIFCVRLKNGGVTDISPSS
SAGSASTDLVARIKCKDSRKIICSTISSSGALFAYSDHVKPNLFELKRNKSGNSWSVKKR
QLPQGLPFAHFMVFSSDSSRLILAGQDRRIYVVDVGSQELLHAFTPCRKDSVDGLPPSEP
PITKMFTSNDGQWLAAVNCYGDVYIFNLETLRQHWFISRLDGASVTAGGFTPKNSNILII
STSSNQVYALDVEAKQLGEWSMRHTFSLPRRYQEFPGEVIGLSFQPSSTSSSVIVYSPRA
MCLIDFGMPVDRDDDTTDLANGLGLTRKVHSNGVLKRKLQGLETKHGGRKNFEFCAFRDP
VLFVEHLSKNSLLVIDKPWMQVVGTFDAQPVHRHIFGT
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggttcacaggatcaactcggtggagtggaatccgtcgcccgtcgtagcccta
gccaccagcgccgacagctcacaggtcgccgccgcccgcgccgacggctcgctcgagatt
tggctcgtctctcccggctccgttggctggcactgtcagcttacaatacacggggaccct
aattctagagtgtcttcgctggtgtggtgtcagtccgggccgaggggtggaccgttgggc
cgattgttgtcttccagtatcgatgggtccatttccgagtgggatttgttcgatttgaaa
caaaaggaggttctaggttcaattggtgtctcgatttggcaaattgctgcagagccatgc
aatgacttgcatcaaaatgggaggcaggaaacaaaatcttatcagaatggccacactagc
ccttcaattaccagtgatgttgatgatgaggagaatagtgaaagtgaagatgaaaatgat
aataaacatgcagtgctggttcatgagcaaaatgacgccgaaagtacccggctagcagct
gcttgcgatgatggctgtgtccgaatctatagtgtttctgatgcagaagaactcatttat
aatagaacgctgcctagggtcagtgggcgcacacttagtgtaacctggagttcagatgga
aataggatttattcagggagtagtgacgggttcataagatgttgggatgttaagttggct
cgggagatctacagaataactgttggtcatggatgcttggctggtggaaatgatctttgc
atatggtcattacttgcattgaggtgtgggacaatagccagtggggatagttctggtagt
gtgaagttctgggatggtcaatttggaacacttttgcatgcacattcaaatcacaagggt
gatgtaaatgctttaactgcagctcccagccataacagagtattttctgctggttctgat
ggtcagatcgtactgtataaactttctactgaggctgttgattctggtgatgaaaaattt
gtcccagctatcaagaaatggatctatgttggctatgtgagagctcatacacatgatgta
agggcgttgaccttagctgtacctatcagtcatgaagatctacctcctgatgaaaaggta
aagaggtcacgaggtccagataagcccctcgacttcagttaccataaatgggctcatttg
ggtgtgcccatgcttatctcagcaggcgatgacactaaactttttgcatattctgtaaaa
gaatttactaagttttctcctcatgacatatgccctgcaccgcaaagaatgccaatgcaa
cttgttcttaaaacacttttcaatcagactccattgctattgattcagtctgcacatttc
ttagacatcttttgtgtgcgattgaaaaatggcggtgtaactgatatcagtcctagctca
tctgctgggtctgcaagtactgatttagtggctagaatcaaatgcaaggattctcggaag
atcatctgcagtacaatctcttcatcaggagcgctatttgcctactcggatcatgtaaaa
cctaatttatttgagttgaaaagaaacaaatcaggcaacagttggtctgtgaagaaaagg
cagctccctcagggattaccttttgcccatttcatggttttcagctctgattcttcgaga
ttaatattagctgggcaggacagaaggatatatgttgtagatgttggaagccaggagctc
cttcatgctttcactccttgccggaaagacagtgttgatggtttacctcctagtgaacct
cccattacaaaaatgttcacaagtaatgatgggcagtggttagctgctgtcaactgctat
ggagatgtctatattttcaatcttgaaacactaaggcaacactggttcatatcaagattg
gatggtgcttcggttactgctggtggatttactcctaaaaatagcaacatcctcatcatc
tccacctcttcaaatcaggtgtatgcattagatgtggaagctaaacaattgggggagtgg
tccatgcgtcacacattttctctgccaaggagatatcaagaatttcctggagaagtcatt
ggtctttctttccagccatcctcaacttcatcttccgttattgtctatagtccaagggcg
atgtgcttgatcgattttgggatgcctgttgatagggatgatgatacaacagacttggca
aatggtctgggattaacaagaaaggtacacagcaatggggtgcttaagcgaaaactgcag
ggattagaaactaaacacggtggtagaaagaactttgaattttgtgcattcagagatcct
gttttatttgttgaacatctatcgaaaaactctcttttggtcatagacaaaccatggatg
caagttgttggcactttcgatgcccagcctgtccatagacatatatttggaacataa
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