KEGG   Salvia miltiorrhiza (redroot sage): 130995318
Entry
130995318         CDS       T09291                                 
Name
(RefSeq) WD repeat-containing protein PCN-like
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
smil  Salvia miltiorrhiza (redroot sage)
Pathway
smil03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:smil00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    130995318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smil03009]
    130995318
Ribosome biogenesis [BR:smil03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    130995318
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_HPS5 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 WDR90_beta-prop_4th PQQ_3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SCAP Pep3_Vps18 WDR54
Other DBs
NCBI-GeneID: 130995318
NCBI-ProteinID: XP_057776544
LinkDB
Position
7:13527767..13534259
AA seq 818 aa
MLKVHRINSVEWNPSPVVALATSADSSQVAAARADGSLEIWLVSPGSVGWHCQLTIHGDP
NSRVSSLVWCQSGPRGGPLGRLLSSSIDGSISEWDLFDLKQKEVLGSIGVSIWQIAAEPC
NDLHQNGRQETKSYQNGHTSPSITSDVDDEENSESEDENDNKHAVLVHEQNDAESTRLAA
ACDDGCVRIYSVSDAEELIYNRTLPRVSGRTLSVTWSSDGNRIYSGSSDGFIRCWDVKLA
REIYRITVGHGCLAGGNDLCIWSLLALRCGTIASGDSSGSVKFWDGQFGTLLHAHSNHKG
DVNALTAAPSHNRVFSAGSDGQIVLYKLSTEAVDSGDEKFVPAIKKWIYVGYVRAHTHDV
RALTLAVPISHEDLPPDEKVKRSRGPDKPLDFSYHKWAHLGVPMLISAGDDTKLFAYSVK
EFTKFSPHDICPAPQRMPMQLVLKTLFNQTPLLLIQSAHFLDIFCVRLKNGGVTDISPSS
SAGSASTDLVARIKCKDSRKIICSTISSSGALFAYSDHVKPNLFELKRNKSGNSWSVKKR
QLPQGLPFAHFMVFSSDSSRLILAGQDRRIYVVDVGSQELLHAFTPCRKDSVDGLPPSEP
PITKMFTSNDGQWLAAVNCYGDVYIFNLETLRQHWFISRLDGASVTAGGFTPKNSNILII
STSSNQVYALDVEAKQLGEWSMRHTFSLPRRYQEFPGEVIGLSFQPSSTSSSVIVYSPRA
MCLIDFGMPVDRDDDTTDLANGLGLTRKVHSNGVLKRKLQGLETKHGGRKNFEFCAFRDP
VLFVEHLSKNSLLVIDKPWMQVVGTFDAQPVHRHIFGT
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgctcaaggttcacaggatcaactcggtggagtggaatccgtcgcccgtcgtagcccta
gccaccagcgccgacagctcacaggtcgccgccgcccgcgccgacggctcgctcgagatt
tggctcgtctctcccggctccgttggctggcactgtcagcttacaatacacggggaccct
aattctagagtgtcttcgctggtgtggtgtcagtccgggccgaggggtggaccgttgggc
cgattgttgtcttccagtatcgatgggtccatttccgagtgggatttgttcgatttgaaa
caaaaggaggttctaggttcaattggtgtctcgatttggcaaattgctgcagagccatgc
aatgacttgcatcaaaatgggaggcaggaaacaaaatcttatcagaatggccacactagc
ccttcaattaccagtgatgttgatgatgaggagaatagtgaaagtgaagatgaaaatgat
aataaacatgcagtgctggttcatgagcaaaatgacgccgaaagtacccggctagcagct
gcttgcgatgatggctgtgtccgaatctatagtgtttctgatgcagaagaactcatttat
aatagaacgctgcctagggtcagtgggcgcacacttagtgtaacctggagttcagatgga
aataggatttattcagggagtagtgacgggttcataagatgttgggatgttaagttggct
cgggagatctacagaataactgttggtcatggatgcttggctggtggaaatgatctttgc
atatggtcattacttgcattgaggtgtgggacaatagccagtggggatagttctggtagt
gtgaagttctgggatggtcaatttggaacacttttgcatgcacattcaaatcacaagggt
gatgtaaatgctttaactgcagctcccagccataacagagtattttctgctggttctgat
ggtcagatcgtactgtataaactttctactgaggctgttgattctggtgatgaaaaattt
gtcccagctatcaagaaatggatctatgttggctatgtgagagctcatacacatgatgta
agggcgttgaccttagctgtacctatcagtcatgaagatctacctcctgatgaaaaggta
aagaggtcacgaggtccagataagcccctcgacttcagttaccataaatgggctcatttg
ggtgtgcccatgcttatctcagcaggcgatgacactaaactttttgcatattctgtaaaa
gaatttactaagttttctcctcatgacatatgccctgcaccgcaaagaatgccaatgcaa
cttgttcttaaaacacttttcaatcagactccattgctattgattcagtctgcacatttc
ttagacatcttttgtgtgcgattgaaaaatggcggtgtaactgatatcagtcctagctca
tctgctgggtctgcaagtactgatttagtggctagaatcaaatgcaaggattctcggaag
atcatctgcagtacaatctcttcatcaggagcgctatttgcctactcggatcatgtaaaa
cctaatttatttgagttgaaaagaaacaaatcaggcaacagttggtctgtgaagaaaagg
cagctccctcagggattaccttttgcccatttcatggttttcagctctgattcttcgaga
ttaatattagctgggcaggacagaaggatatatgttgtagatgttggaagccaggagctc
cttcatgctttcactccttgccggaaagacagtgttgatggtttacctcctagtgaacct
cccattacaaaaatgttcacaagtaatgatgggcagtggttagctgctgtcaactgctat
ggagatgtctatattttcaatcttgaaacactaaggcaacactggttcatatcaagattg
gatggtgcttcggttactgctggtggatttactcctaaaaatagcaacatcctcatcatc
tccacctcttcaaatcaggtgtatgcattagatgtggaagctaaacaattgggggagtgg
tccatgcgtcacacattttctctgccaaggagatatcaagaatttcctggagaagtcatt
ggtctttctttccagccatcctcaacttcatcttccgttattgtctatagtccaagggcg
atgtgcttgatcgattttgggatgcctgttgatagggatgatgatacaacagacttggca
aatggtctgggattaacaagaaaggtacacagcaatggggtgcttaagcgaaaactgcag
ggattagaaactaaacacggtggtagaaagaactttgaattttgtgcattcagagatcct
gttttatttgttgaacatctatcgaaaaactctcttttggtcatagacaaaccatggatg
caagttgttggcactttcgatgcccagcctgtccatagacatatatttggaacataa

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