Salvia miltiorrhiza (redroot sage): 130995359
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Entry
130995359 CDS
T09291
Name
(RefSeq) LEC14B protein-like isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130995359
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130995359
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SCAP
WDR54
PEP5_VPS11_N
Cytochrom_D1
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
130995359
NCBI-ProteinID:
XP_057776590
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Position
7:14017021..14021701
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AA seq
519 aa
AA seq
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MLSIMQDFIFYEHVTPVVTMLSVPEDADTDSMIGYRFSKMEIESELSDGSSDDGGGSSWP
SQKPDSLDQDIAQLTKLQSRPNEHFSSVSPRKHDFPISTLKMLAGREANLSGRGRFSLAD
CRHVLSRYLPVYGPCIVDQMSTRAYVSQFSADGSLLIAAFQGSQIRIYDVEKGWKVRKNI
LARSLRWTITDTSLSPDQQWLVYASMSPVIQIVDAGSDTCESLANITEVHDGLDLSSHDD
GGYSFGIFSLQFSTDGQEVVAGSSDGDIHVCDLNTKKVSLHISAHTSDVNSVCFVDESGH
LIFSGSDDSFCKVWDRRCFAGSGKPAGVLMGHLEGITFIDSRRDGRYLISNSKDQAIKLW
DLRKMSSNSICYQGYRNYEWDYRWMNYPQQARDFKHPHDQSVATYKGHSVLRTLIRCYFS
PQYSTGQKYIYTGSHDSCIYIYDLVSGDQVAKLKHHRSTVRDCSWHPTYPMLVSSSWDGE
VVKWEFPGDGDAATATISNTNLYDPRLQAQNLFNNLLLR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttatccattatgcaagatttcattttttatgaacatgtaacgccggtcgtcacaatg
ttgtctgtacctgaagatgcagacactgatagcatgataggctatagatttagtaaaatg
gagattgaatctgagctctctgatggctcaagtgatgatggtggtggcagttcttggcct
agtcaaaagccagattcattagatcaagatatagctcagctaacgaagcttcagtcgagg
ccaaatgagcatttcagcagcgtttcacctaggaaacacgacttccctatctctactttg
aagatgttggcaggtcgagaagctaatctctcgggaagaggaaggttctcattagcagat
tgtcgtcatgttttgagtagatatttgccggtttatggtccttgcattgtagaccagatg
tctacaagggcttatgtatcccagttttctgctgacggttcccttcttattgctgcattt
cagggtagtcagattagaatatatgatgttgaaaaggggtggaaagttcggaagaacatt
ctggccagaagcctaaggtggacgatcactgatacttccctttctcctgatcaacaatgg
cttgtctacgcaagcatgtcacccgtcattcagattgttgatgctggatctgacacgtgt
gaatctcttgcgaacatcactgaagttcacgacggtttggatctctcgtctcatgatgat
ggaggatactcatttgggattttttctctgcaattctcaactgatgggcaagaagttgtg
gctggaagcagcgatggggatatacatgtttgtgacctcaacacgaaaaaagtctctctt
catatatcagcccacacgtctgatgtcaacagtgtatgtttcgttgacgagagtggccat
ctcattttttctggcagcgacgatagcttctgcaaggtttgggacagacgctgctttgca
ggcagcggcaagccagccggggtgcttatgggtcaccttgaggggatcaccttcattgat
agccgcagagatggccgttatttgatatccaacagtaaagatcaagctatcaaactatgg
gatctccgcaaaatgtcgtctaactctatttgctatcaaggatacaggaactacgaatgg
gattacagatggatgaactaccctcaacaagcaagagatttcaagcatccacatgatcaa
tccgtagctacgtataaaggccattcagtcctacgcacactcatccgttgttacttctcg
ccacaatacagcacagggcagaagtacatctacacaggatcacacgattcctgcatctac
atttatgatttggtaagtggtgatcaagtcgcgaagctaaaacaccatagatctacggtg
agggattgtagttggcaccccacctacccgatgctagttagctcgtcgtgggatggtgaa
gtggtgaagtgggagttccccggagatggagacgcagcaacagctaccatcagcaacaca
aatttgtatgatccccgcttgcaagctcaaaatctgttcaataatttgttgttgcggtaa
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