Salvia miltiorrhiza (redroot sage): 130995381
Help
Entry
130995381 CDS
T09291
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130995381
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130995381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
130995381
NCBI-ProteinID:
XP_057776634
LinkDB
All DBs
Position
7:complement(14274175..14279615)
Genome browser
AA seq
406 aa
AA seq
DB search
MGCGRGGWILIRSCLMLLLMMNQAGCEAKRRPLPNHPVFDVTKFNAKGDGKTDDAMALIR
AWVAACQSGAAAKVLIPRGNFVASEVVLVGPCNSTQPITVEIKGTLLADTDLSSYSQSAW
IMIKRVDGLVVTGAGTIDGRGQSVWKYGKDRDLPLLPVALMFQSVQNARVSGLKLVNSMG
FHLKVTDSKNIDITKLGIAAPLHSPNTDGINLSNSTNVKITDSVIGTGDDCVSIGHGTQN
ILVAGVTCGPGHGLSVGSLGKRVDETNVRGITIRNCTLIGTTNGARIKSYHDSPKMEASS
IVFQNLVMKGVKNPIIIDQHYNSKNKGQQSSVRLSDIHFRDIRGTSVSPVSINLNCSSLV
PCEKVELANINLTPFNSSIGDISCACSNAQIFSRGQIIPAMPARCT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcggcagaggtggttggattttgattagatcatgtctcatgctgctgcttatg
atgaaccaggctggatgtgaagccaagcgtcgccccctacctaatcacccagtttttgat
gttacaaagtttaatgctaaaggtgatggcaagacagatgatgcaatggctttgataaga
gcatgggtagcagcatgtcagtcaggtgcagcggcgaaggttttgattcctcgtgggaat
ttcgtggcgagcgaagttgtgttggtcggcccttgcaattctacacaaccaatcacagtt
gaaatcaaaggcactctcctcgcggatactgatctcagttcgtattcacaaagcgcgtgg
atcatgatcaagagagtcgacggcctcgtcgtcaccggcgccggaaccatcgacggtcgt
ggccagtctgtttggaagtacggcaaggatagagacctccctcttcttccagtcgctctc
atgtttcagtccgtgcaaaatgcgagggtgtctgggttgaagttggtaaacagcatgggt
ttccatttaaaggttactgacagcaaaaacatagatatcacgaagcttggcatcgccgca
cctctccacagccccaacaccgacggaatcaaccttagcaactcgacgaatgtaaagata
accgattccgtgatcggaaccggagacgactgtgtttcgattgggcacggcacccaaaac
attctcgtggccggtgttacctgcggccccggccacggccttagcgttgggagcttggga
aaacgagtagacgagacaaacgtgagaggaatcacaattaggaattgcacgctgattggg
acgacaaatggagcacgaatcaaaagctaccacgactctcccaagatggaagctagcagc
attgtgtttcaaaatctggtgatgaagggagtcaaaaaccctattataatcgatcaacat
tacaactccaagaataagggccagcaatcaagcgtgagactgagcgatattcacttcaga
gacataagaggcacatctgtttcaccagtttcaataaatttgaactgtagttcgttagtc
ccatgtgagaaggttgaattagcaaatattaatttaacgccatttaattcaagtattgga
gacataagttgtgcatgttcaaatgcacaaatcttcagtcgaggtcaaatcatccctgcc
atgcctgcccgatgcacttga
DBGET
integrated database retrieval system
