Salvia miltiorrhiza (redroot sage): 130995862
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Entry
130995862 CDS
T09291
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04120
Ubiquitin mediated proteolysis
smil04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130995862
04120 Ubiquitin mediated proteolysis
130995862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130995862
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130995862
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130995862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_5
zf-RING_11
zf_RING_Vps8
FAR1_N
GTP-bdg_M
GerE
zf-HC5HC2H
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
130995862
NCBI-ProteinID:
XP_057777299
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All DBs
Position
7:28797091..28801672
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AA seq
526 aa
AA seq
DB search
MMKLQTYAGFSLIAALAIIYHAFDSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKSLHWLA
QKRVEYIETTPTVPKLSHVRIVSFMVFLLLIDSIFLYDSVEHLIETRQASVALFFSFEYI
ILATTTLSTFVKYMFHVSDMLMEGQWEKKAVCTFYLELIRDLLHLTLCMCFFLVIFLNYG
VPLHLIRELYETFRNFRIRVADYIRYRKVTSNMKDRFPDATPDELSVSDATCIICREEMI
AAKKLVCGHLFHVNCLRSWLERQNTCPTCRALVIPPENGASTTSTRTNSQQQGTGTAGTS
SEGSSGDGVANENVSQHQTRLQAAAAAATLYEKSFVYPSPNALMRSPGYASPSQIFQHSI
IAKDGEEGAASELSEQFVQTTLDQLPQFALAPTQFPHVNGRFGEGTSSESHLDLQRKLIE
HQIEFLQNQLQLLRNGEKTKDIGTSFDIKGKSVSSSSSSVIDSGEI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttgcaaacttacgctgggttcagtttgatagctgcattggctattatttat
catgcctttgatagtagaggccaattttaccctgcaatggtttatttgtcgacctcaaag
atcagtctagtgcttcttctgaatatgggtttggtttttatgtgcatcctgtggcaattg
accaagaaaatcttccttggttcgctccgagaagcagaggtcgagaggctgaatgagcag
tcatggcgggaggtcatggaaatattgttcgcgataactatttttagacaagatttttca
gttacatttcttgcaatggttactgctttgcttctgataaaatctttgcattggttggcc
caaaagagggtggaatatatagaaacaactccgactgttccaaagctatctcatgtacgc
atcgtatctttcatggtgttcctactccttattgacagcatctttctctatgactcagtt
gagcatttgatagaaaccagacaagcttcagtcgcactgttcttttcatttgaatacata
atcctggcaacaacaactctctcaacctttgtgaagtatatgttccatgtcagtgacatg
cttatggaaggacaatgggaaaagaaggctgtctgcacattttacttggagcttattcga
gacttgctgcacttgactctctgcatgtgtttcttccttgtcatctttttgaattatggt
gtgcctcttcacttgatccgcgagctgtacgagacattccgtaacttcagaatccgtgtg
gctgattatatacgttaccgaaaggtcacttcaaatatgaaagatcgtttccccgatgcg
actcctgacgagctcagtgtaagcgatgcaacctgcattatatgtcgtgaggagatgatt
gcagccaaaaaacttgtttgtggacatcttttccatgtgaactgcctcagatcatggttg
gaaaggcaaaacacatgccctacgtgcagagctcttgttataccacctgaaaacggggca
tccactacttcaacaaggactaatagccagcagcaaggaactggcacggctggtacttct
tcagagggatctagtggtgatggcgtggcaaatgagaatgtcagtcaacatcagactaga
ctccaagcagctgctgctgctgccactttatatgaaaaatcttttgtttatccttctcca
aatgctctaatgcggtcacctggatatgcctcaccttcacaaatatttcaacactctata
atagcaaaagatggtgaggagggtgctgctagcgaattgtcggaacagtttgtacaaaca
accttggatcagttaccacagtttgctttggctcctacacagttcccacatgttaatggg
agatttggagaagggacttcatcggagtctcaccttgatttgcaaaggaagttaattgag
caccagattgagtttctgcaaaaccagctccagcttctaagaaatggggagaaaacaaag
gatatagggacatcatttgatatcaaagggaagtcagtatcgtcatcatcttcatctgtg
atcgactctggtgagatataa
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