Salvia miltiorrhiza (redroot sage): 130996237
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Entry
130996237 CDS
T09291
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130996237
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130996237
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF7460
NosD
Motif
Other DBs
NCBI-GeneID:
130996237
NCBI-ProteinID:
XP_057777730
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Position
1:complement(56050375..56052368)
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AA seq
397 aa
AA seq
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MATSRMIQILILSLYYYHSSSISVLAANNPTYNVQSYGAKSDGKSDCTKAFLSAWGAACA
TTAPATIYVPPGRYLLRNAYFSGSLCKNTAITIRIDGTLVAPSDYNAIGNSGNWLKFERI
TGVSIYGGTLDGQGANLWACKNSGKSCPKGATSLAFYNSNNIRINGLVSVNSQMFHILID
GCRNANLVNVRVSAPGNSPNTDGIHVQQSSGVTIMNSHVATGDDCVSIGPGASNLWIENL
ACGPGHGISIGSLGWDMNEAGVQNVTVKTATFSGTENGVRVKTWARPSNGFVKDVLFQHL
VMVNVQNPVIIDQNYCPDHENCPHQGSGVKISNVRYEDIHGTSATQVAVKFDCSKTRPCS
GIMLDEVNLTFRDKPATASCANAGGTADGVVKPSSCL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaagaatgatccaaattctcattttgtcactttattactaccactcttca
tcaatatccgtacttgcagccaataatcccacctacaatgtgcagtcctacggcgcgaaa
tccgatggaaaatccgattgcaccaaggcatttctgagcgcttggggggcggcgtgcgcc
accacggccccggccaccatatatgtcccgccggggaggtacctcttgcgaaacgcatat
tttagtggcagtttgtgtaaaaacactgccataactatacgcattgatgggacccttgta
gctccctcggattacaatgcgattgggaatagtgggaactggttgaagttcgaaaggatc
accggagtttctatctacggcggaaccctcgacggccaaggcgccaatttgtgggcttgc
aagaactccggcaagagctgccctaaaggagctacctcactagccttctataattcgaac
aacatacggatcaacggattagtgtccgtaaacagtcaaatgtttcacattctgattgat
ggatgtcggaatgcgaatctggtgaacgtgagagtgtcggcaccggggaacagccccaac
accgacggcattcacgtgcagcagtcgtccggcgttaccatcatgaattcacacgtggcc
accggcgacgactgcgtctccatcggccccggcgcctccaacttgtggattgagaacctc
gcctgcggccccggccacggcattagcattgggagtctaggttgggatatgaacgaagcc
ggcgttcaaaacgtgacagttaaaactgctacatttagtggaaccgaaaacggtgtgaga
gtgaagacatgggcaaggcctagcaacggatttgtgaaagatgttcttttccagcatcta
gtaatggttaatgtccaaaatcctgttatcattgaccaaaattactgccccgaccacgaa
aattgcccccatcagggttcaggtgtaaaaattagcaacgtgagatatgaagatatacac
ggaacatcggcaacacaagttgcagtaaaattcgactgcagtaaaacgaggccgtgcagt
ggcattatgttggatgaagtgaacctgaccttcagagacaagccggccacggcgtcgtgc
gccaacgccggaggcacggccgacggagttgtcaagccgagcagctgcttataa
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