Salvia miltiorrhiza (redroot sage): 130996334
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Entry
130996334 CDS
T09291
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Module
smil_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130996334
Enzymes [BR:
smil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130996334
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
130996334
NCBI-ProteinID:
XP_057777792
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Position
1:complement(56035765..56037600)
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AA seq
387 aa
AA seq
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MQMASPILLIQLVLLHQSWASPTSYNVVDLGAKGDGKTDSTSAMSKAWNQACASTKPSTI
YIPQGTFLLRTLHFRGPCNNPDIAITIAGTLLAPSAYIAAANWLLFEGVDGVSIRGGTLD
AQGGSLWACKKSGRNCPRGATTLGITKSKNIEISGLTSLNSQMFHIVINGCQNVKLQGAK
VRAPENSPNTDGIHVQLSTAVTILNSVIRTGDDCISIGPGTANLWIQNVACGPGHGISIG
SLGKGLEEAGVQNVTVRSVKFENTQNGVRIKTWGRPSKGFVRNVLFGHVLMNNVQNPIII
DQNYCPNNQNCPGQVSGVKISDVIYQDIRGTSATEVAVKFDCSKANPCRRIKLKNVNLSY
RDQRARALCSNAAGTAAGRIEPSSCLY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggcaagccccattctattaattcagttggtgcttctccaccaatcatgggct
tccccgacctcgtacaatgtagtggatttaggagcaaagggtgatggcaaaaccgactcc
acatccgccatgtccaaagcatggaaccaagcttgtgcctctacaaaaccctccaccatc
tacattccacaaggcacattcttgctcaggactctacactttaggggtccatgcaacaac
ccagacatcgccatcaccatcgccggcaccctcctcgccccgtccgcctacattgccgcc
gccaactggctgctcttcgagggcgtcgacggcgtttccatccgcggcggcaccctcgac
gcccagggaggcagcttgtgggcctgcaagaaatccggcagaaactgccctcgtggtgct
acgacattaggcattaccaaatccaagaacatcgaaataagtggattgacatccctaaat
agccaaatgttccacattgtgataaacggatgccaaaatgtgaaattacaaggagccaaa
gtaagggcgccggaaaatagccccaacaccgacggaatccacgttcagctctcgacggcc
gtcaccattctcaattcggtaatccgcaccggagatgactgcatctccatcgggccgggc
accgccaatttgtggatccaaaatgtcgcctgcggccccggccacggcatcagtatcgga
agcttgggcaagggactagaagaagccggtgtacaaaatgtgacggttagaagtgtaaag
tttgagaacacacaaaatggtgtgagaataaagacgtggggaagaccaagcaaagggttt
gtgagaaatgttttgtttggacatgtcctcatgaacaatgtccaaaatcccattatcatt
gaccaaaattactgcccaaataaccaaaattgccccggacaggtatccggggtgaaaatt
agtgatgtcatttaccaagacattcgaggcacatcagcaactgaagttgcggtgaaattt
gattgtagtaaggctaatccgtgccggagaatcaagctcaaaaacgtcaatttgagttac
agagaccaacgggctcgagcgttgtgctccaacgctgccggcacggccgccggtcggatc
gaaccgtccagctgtttgtactga
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