Salvia miltiorrhiza (redroot sage): 130996771
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Entry
130996771 CDS
T09291
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
130996771
04121 Ubiquitin system [BR:
smil04121
]
130996771
Enzymes [BR:
smil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130996771
Membrane trafficking [BR:
smil04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130996771
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130996771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Prok-RING_4
FAR1_N
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
130996771
NCBI-ProteinID:
XP_057778056
LinkDB
All DBs
Position
8:complement(44133107..44135032)
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AA seq
388 aa
AA seq
DB search
MSSTFWCHRCNRFLRVWNPDSIDCPDCNSGFVEEVETPTPSPFTDSRQRRFPAAAMYMMR
APDPCPISGTGSVSSPRLRRSRRNGGDRSPFNPVILLRGPNDGGLGGGGGGGGGGGGGGR
AAGGGGFELYYDDGEGSGLRPLPATMSEFLLWSGFDRLVDQLSQIEANGIGRIESNPPAS
KAAIESMPTVAIIDGHIAVESHCAVCKEAFELGSEAREMPCNHLYHQDCILPWLSLRNSC
PVCRHELTTDNENGGGDENGRGNEAGGEDETVGMTIWRLPGGGFAVGRFSGGGRSGEREL
PVVYTEMDGGFNNNGAPRRVSWGSRGSVSRNRGGLRRLFTGFLSCFGRSGSSTSASRISR
RSGSLSSFFSSTPRRDRALSFEENNRRW
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacattttggtgtcacagatgcaaccgcttccttagggtttggaacccggac
tccatcgattgccccgattgcaactccggattcgtcgaagaggtcgagactccgacgcca
tctccatttaccgattccagacaacgccgattccccgccgccgccatgtacatgatgcgg
gcacccgatccatgccctatttcagggacgggctccgtatcgagccctaggctgcgaagg
agccgtagaaatggaggcgaccggtcgccgtttaatcctgttatccttctccgtgggccc
aacgatggtggacttggaggcggaggcggaggcggaggtggaggtggaggtggaggcaga
gccgccggtgggggaggatttgagttgtattatgacgacggagagggatcgggcctgagg
ccgttaccggcgactatgtcggagtttttgctctggtcgggtttcgataggctggtggat
cagctatcacaaattgaggcgaacgggatcgggagaatcgagagcaatccgcctgcatcg
aaagccgcaatcgagtctatgccgacagtggcgataatcgatggccacatagcggttgaa
tcacactgcgctgtctgcaaggaggcgttcgagctggggagcgaggcgcgcgagatgccc
tgcaatcatctgtaccatcaggattgcattctgccgtggctctcgttgaggaattcttgc
cccgtgtgtaggcacgagttgaccactgataacgagaatggtggcggggatgagaatgga
cgagggaatgaggcgggaggcgaggatgagacggtgggaatgacgatatggaggttgcca
ggcggtggttttgcggtggggaggttttcgggaggggggagaagcggcgagagagagctg
ccggttgtgtacacggagatggatggcggattcaataacaatggggcgccgagaagggtt
tcgtggggctctaggggcagcgtttcgaggaataggggagggttgaggagattgtttact
ggcttcttgtcttgctttgggagaagtggatcttccacgtctgcttctagaattagtcgg
aggagtggttcgctatcatcgttttttagctccacaccaagacgagatagagctttgagt
ttcgaggaaaataacagaagatggtga
DBGET
integrated database retrieval system
