Salvia miltiorrhiza (redroot sage): 130997232
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Entry
130997232 CDS
T09291
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smil03000
]
130997232
04121 Ubiquitin system [BR:
smil04121
]
130997232
Transcription factors [BR:
smil03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130997232
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
130997232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
ssDBP
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
130997232
NCBI-ProteinID:
XP_057778475
LinkDB
All DBs
Position
8:25276958..25281071
Genome browser
AA seq
1112 aa
AA seq
DB search
MSSEQNRRRENINFRPRNNNSSRNNRREWVPRGTAPVVAVVQVPPTSADSADQNEIGNGG
ALVDRPVHPVVPNRNRTHGASRGNPGHRHVVQREKEKVEKKHFRDDNVRMMKGVNIPQLV
QEIQDKLTKGSVECMICYDMVRRSAPVWSCSSCYSIFHLNCIKKWARAPTSVDLMAEKNQ
GTNWRCPGCQSVQLMSAKEIRYICFCGKRPDPPSDLYLTPHSCGEPCGKPLERELPGSGM
SDEDICPHVCVLQCHPGPCPPCKAFAPPRRCPCGKKVITTRCSDRKSVLTCGKRCDKLLD
CGRHSCERVCHIGPCDPCQVLVNASCFCRKKVEVLLCGDMAVKGEIKDQDGLFSCNLACE
NKLNCGNHICPEVCHPGPCGECELLPGKIKACCCGKTSLNEERQNCLDPIPTCTQNCGKT
LPCKLHNCQSVCHSGPCPPCNVLVTQKCRCGSTSRTVECYRTALDGEKFTCDRPCGRKKS
CGRHRCSERCCPLSNSSSSSMADGDPHLCTMPCEKKLRCGQHSCISLCHSGHCPPCLETI
FTDLTCACGRTSIPPPLPCGTPPPSCQYPCSVPQPCGHPSSHSCHFGDCPPCTVPIPKEC
VGGHVVLRSIPCGSKDIRCNKLCGKTRQCGLHACSRTCHPPPCDSSAAPSTSLRTSCRQT
CGAPRRDCRHTCTAICHPATPCPDVRCEFPVTITCSCGRVNATVPCDAGGSSGGYTADTV
LEASIIQKLPLPLQPVEENGEKTPLGSRKLMCDDECAKVERKKVLADAFGVTPPTLDTLH
FGDTASVSEVLSDLLRRDPKWVLSVEERCRYLVLGRGRGGINALKVHVFCVMTKEKRDAV
RLVAERWKLSVNAAGWEPKRFIIVHVTPKSKAPARMLGVKSCNPGNMLQPPIFDPVVDMD
PRLVVALFDLPREADVSALVLRFGGECELVWLNDKNALAVFSDPGRAATAMRRLDQGSVY
YGAVAVPQNGGASVATSGASAWGSSAASKDPASGAALKGNPWKKVVLQESEYKESSWGAE
EWSVNAADPKLHHWKDKEAPTASSSNRWSVLQSGSTSKSSDASAKIEKQAETPNVSASKG
EESSLNAAPLQPEGMSNSMSGDVVDDWEKAYD
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagcaaaatagacggagggagaacattaattttcggcctagaaacaacaat
tcttcgcggaacaaccgtcgcgagtgggtccctcggggcactgcgcctgttgttgccgtc
gtgcaagttccaccaactagtgctgatagtgctgaccagaatgagattggaaatggtggg
gccttggtcgataggcccgttcatccggttgttccgaaccggaataggacccatggtgca
tcaagaggaaaccctggccaccggcatgttgtgcaaagggagaaagagaaggtggagaag
aagcattttcgtgacgacaatgtcaggatgatgaagggggttaacataccccaacttgtg
caggaaattcaggataagcttaccaagggatctgttgagtgcatgatctgttatgacatg
gttcgaaggtctgcacccgtttggtcgtgctccagctgctattcgatttttcacctgaat
tgcataaagaaatgggcaagagctccaacttctgttgatttgatggctgagaagaatcag
ggtactaattggcgttgccctggatgccaatcggtgcagcttatgtcagctaaggagatt
cggtacatctgcttttgtgggaagagaccagacccgccttcggatttatatttgactccg
cactcttgtggagagccctgcgggaaaccactggaaagagagcttcctggtagtggcatg
agtgatgaggatatatgtcctcatgtttgtgtactgcagtgccatccagggccttgccct
ccttgtaaggcctttgctcctcctcgtaggtgcccttgtgggaagaaagttattaccacg
agatgctccgatcggaagtctgttctcacttgtgggaagaggtgtgataagcttcttgac
tgtggtcggcattcctgtgaaagagtctgtcatatcgggccatgtgatccttgccaggtc
cttgtcaatgcttcttgtttctgtaggaaaaaggttgaggttcttctttgtggagatatg
gctgtcaagggagaaatcaaggaccaagatggtttattctcatgcaacttggcttgtgag
aataaattgaattgtggaaaccatatctgcccagaagtttgtcatccaggcccatgcggg
gaatgtgagctgctgccaggaaagattaaggcatgctgctgtggtaagactagcttgaat
gaggaaagacaaaattgtttggatccaattccaacttgcacgcagaattgtggcaagacc
ctgccttgcaagttgcataactgtcagagtgtgtgccattcagggccgtgtccaccctgt
aatgtgcttgttacccaaaagtgtcggtgtgggtcaacctctcgaactgtagagtgctac
agaactgctttagacggtgaaaaatttacttgtgatagaccttgtggccggaagaaaagc
tgtggcaggcatcggtgcagtgagcgttgctgtcctctttctaattcctcgagttcttcc
atggctgatggagatccacatttgtgcacaatgccatgtgagaagaagctgcggtgtggt
cagcattcttgcatatcactgtgtcacagtggtcattgtcctccttgcctggagacaatt
ttcaccgacttgacttgtgcttgtggtcgaacttctattcctcctcctttgccctgtggt
acacctccaccttcatgtcagtacccttgctcagttcctcagccttgtggtcatccatct
tcacacagctgccactttggggactgtccaccttgcacagttcctatccccaaggagtgt
gtgggtggacatgtagttcttcgaagtatcccttgtggatcaaaagatattagatgcaat
aaactatgtggaaagacgaggcagtgtggtctacatgcatgctccagaacttgtcaccca
cccccatgtgattcttctgctgcaccaagtacgagtttgagaacatcttgtaggcagaca
tgcggtgctccaaggagagattgtaggcatacttgcacagctatttgtcacccagccact
ccctgtcctgatgtaaggtgcgaatttcccgtcacaatcacttgctcctgtggccgagta
aatgcaacagttccttgtgatgctggtggcagcagtggaggatatactgctgatacagtt
cttgaagcttctataatacaaaagttgccgctgcctctacaacctgttgaagaaaatggc
gagaaaactccacttggttcgaggaagctaatgtgtgatgatgaatgcgcaaaagtggag
cgcaaaaaggttcttgctgatgcttttggtgtcactcccccgaccttggacacacttcac
tttggtgatactgcatctgtgtctgaagtgctttctgacctcctgaggcgtgaccctaag
tgggtcttgtccgtggaagagagatgcaggtatctggtccttggtaggggcaggggcggg
ataaacgcccttaaagtccatgtgttctgtgtgatgacaaaggaaaaaagagatgcagtg
aggctggtagcagaaaggtggaaactttcagtgaatgcagctggatgggagccgaagaga
tttatcattgttcatgtcacgcccaagtcaaaagccccagctcgtatgcttggtgttaag
tcctgcaatcctggtaacatgttgcaaccaccgatttttgatcccgtggtagacatggat
ccccggcttgttgtggccttatttgatttacctagggaagctgacgtgagtgcgctggtg
ttgaggttcggtggggaatgcgagctggtttggttgaacgataagaatgcattagctgtg
ttcagtgatccagggagggcagcaactgctatgaggagattggatcaggggtctgtgtat
tacggcgccgttgcagttcctcagaatggcggggcctcggtagcaacttcgggcgctagt
gcatggggatcttctgcagcatccaaagatcctgcatcgggagcagcactgaaagggaat
ccttggaagaaggttgtactgcaggagtctgagtataaggagagttcgtggggtgctgag
gagtggtctgttaacgctgctgatcccaaattgcatcactggaaagataaagaagctcca
actgcttcttcaagcaaccgctggagtgtcctgcaatcaggtagcacttcaaaatcatcc
gatgcttctgcgaagatcgagaaacaggcagaaactcctaacgtgtctgcttcgaaggga
gaggagtctagcttgaatgctgcaccattgcagccggaaggcatgagcaacagcatgtct
ggtgatgtggtggacgattgggaaaaggcctatgattga
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