Salvia miltiorrhiza (redroot sage): 130997246
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Entry
130997246 CDS
T09291
Name
(RefSeq) cell division cycle 20.3, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130997246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smil04121
]
130997246
03036 Chromosome and associated proteins [BR:
smil03036
]
130997246
Ubiquitin system [BR:
smil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
130997246
Chromosome and associated proteins [BR:
smil03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
130997246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
DUF2509
NBCH_WD40
Beta-prop_Vps41
Beta-prop_WDR11_2nd
DUF1513
Motif
Other DBs
NCBI-GeneID:
130997246
NCBI-ProteinID:
XP_057778495
LinkDB
All DBs
Position
8:complement(25465970..25468839)
Genome browser
AA seq
451 aa
AA seq
DB search
MEDERDWRLASDWYSPTRLHDSPVKYDFPGDRFIPNRSLMDLDQAHGALTNRVVQRPTHT
KSSIEYRKSLSNLTLNADGRPFQMLVFRGSPKSSRKPNPMVDETRRSNSEYPTCIPLRRF
PKGESKILDAPGISHDYYLNIVDWGKENILAAALDRRLYLWDANTGKVDLLSEVKEDDYL
ASVSWSENGRVVAAGNSCSTVHLYDVETLHLVRLLEGHRGRVGSIAWNGHTVACGTSSGD
ITNHDVRVRNSQVCRVKVHKGEVCGLKWSGTGSMLASGASDRRVYLWDACKMSEKHHVYR
FDHHCAAVKALAWCPHDYNVLASGGGLEDGNIKLWNTQKGTCTSSTETKSQICGLQWNKH
HKELLSGHGYGYECQNQLCLWRYPSMSRIGESRNAPSRVLHLTQSPNGLTVVSAGEDEAL
RFWNVFGPEPPGNSRMSYLQSLLSLKTSPIR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagagggattggagactcgcctccgattggtactctccaactcgcctccac
gacagtcccgtcaaatatgattttccgggcgataggtttattccaaatcggagcctgatg
gatctcgatcaagcccacggtgcgctgaccaacagggtcgtccaacgccccacacatacc
aaatccagtattgaatataggaagtctttgagcaatctgaccttgaatgctgatggtagg
ccatttcagatgcttgttttcaggggaagccccaaatcaagtagaaaaccgaaccctatg
gttgatgagacgcgacgcagtaacagtgagtaccctacttgtataccattacgaagattc
cccaagggtgaatctaaaattctggatgcccccggaatcagccacgactactatctcaac
attgttgattgggggaaggaaaacattctagcagctgctcttgacagaagattatacctg
tgggatgcaaatactggtaaagttgatctgttatcagaggtgaaagaagatgactatctt
gctagtgtaagctggtctgaaaatggaagagtggtagcagcagggaatagttgctctaca
gtacatctctatgatgttgagactctccatctagtgagattgttagagggtcaccgtgga
cgtgtgggatctattgcgtggaatggtcacacagtagcttgtggaacctctagcggagat
atcaccaaccatgatgttagagtgaggaacagtcaagtgtgccgtgtgaaagtgcacaag
ggcgaggtctgtggtttgaaatggtcgggcacgggcagcatgctggcgagtggtgcaagc
gataggagagtctacttgtgggacgcgtgtaagatgagcgaaaagcaccatgtctacaga
ttcgatcatcattgtgcagccgtgaaagctctggcgtggtgccctcacgactacaacgtg
ctagcatcgggtggtggcttggaagatggcaatatcaagttatggaacactcaaaaaggg
acctgcacctctagcacagaaactaagtcacagatatgtgggctgcaatggaacaagcat
cacaaagagttattaagtgggcatggctatggctacgaatgtcaaaaccagttatgcttg
tggaggtacccttccatgtccagaataggagaatctcggaatgcgccgtctcgagttctc
catctaactcagagccccaatggtctaaccgtcgtctcagccggcgaagacgaggctctt
cgtttctggaatgtatttggcccggagccccccggcaattcaagaatgtcctatttgcaa
agccttttatctctcaagacatcacccataaggtga
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