Salvia miltiorrhiza (redroot sage): 130997300
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Entry
130997300 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130997300
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130997300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
130997300
Membrane trafficking [BR:
smil04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130997300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
VPS8_N
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
TPR_VPS8_2
WD40_CDC20-Fz
Beta-prop_EML
Clathrin
Beta-prop_HPS5
WD40
WD40_Prp19
zf_RING_Vps8
Beta-prop_LRRK2
Beta-prop_RIG_2nd
zf-RING_Vps41
Beta-prop_TEP1_2nd
zf-RING_2
AbiEi_3_N
Motif
Other DBs
NCBI-GeneID:
130997300
NCBI-ProteinID:
XP_057778554
LinkDB
All DBs
Position
8:complement(26140173..26149422)
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AA seq
1883 aa
AA seq
DB search
MEYSIAVDVDMDLDSLLQSHGGETDSDEEDRHRRTVDEILLNHSSSSPSPPSSPSFPLNG
DGDDDNNVSATSRDHRLSNSHSIPLVESHNYRYNSATNSSRVNYAARVLPPLFGNGAVRS
NAKPGAALAAAAAASRSIPTPHATAIKLRRANTAVPSLQSSLSETAENIDSANSSLSAAP
SSHFHLSQSQEEEGVQLPLGNIHSDSTDDDDADGGIDHGAYSPEDRHQHKSREDATLKVS
YEDEISRADKDAECTSIIESEKDQIPVIEQFSSPSIGEKNEQCAEVRAAGEYGDMALPSP
ASSGVDHKEDISGGEVASNSENTVAEPGDCDYTSGHNDAAELLEELVSQGEGDDNYTKLQ
QKSESSVKPLDLAEEIEKKHAFTGLHYEEGAAAQPMRLEGVKRGSTVLGYFDVRSDNVVT
PTISSQTFRQDHGSPQVLSVHLNYIAVGMSKGSIFVVPSKYTAHHVDNMDTKMTSLGLQG
DRSHVPVTSMCFNQQGDILFAGYGDGHYTVWDVQKASALKVITEHRAPVVHMLYLGQDTQ
VTRQFNVVSGDSKGVVKLIRFSVVPWLNRISYTKSMKLLDETTSRVVCASPLLYNEGYGG
AMLSSQSSSAVSTSSISSMMGGMVDEGVVIFITHQSALVAKVIPTVEVYAQIPKPDGVRE
GSMPYAAWRCMSQSLSSSSENALVEASDKASLLAIAWDQKVQVAKLLKSELKVIEKWTLE
SAAVGLAWLGDQMLAILTSTAHLCLYAKDGNLIHQISFSVDGFQGDNLISHHIYFTNSFG
NPEKAYHNSISVRGATIYILGQEHLIVSRLLSWKERIEVLRKAGDWIGALNMAMSLYDGQ
SHGLVDLPKNLDDLQRTVMPYLAELLQAYVNEVFSYLSVACYNQNTKVDQSNEIKEQYIR
VGGVAVEFCVHIRRTDILFDDIMSKFDEAQQKETFLELLEPYILKDMLGSLPPGIMQALV
EHYSKRGWLQRIEQCVLHMDILSLDFNQVVRLCREHRLDCALIYLFNKGLDDFRTPLEEL
LLVLRDSTRENATSLGYRVLVYLKYCFQGLAFPPGHGNLSPLRVTSLRKELLDFLLEDSS
APNSWAVTSLSSSEAYANMLHLLELDTEATLQVLKLAFVDVELSTSGQPSEEATNINMEP
DESDKLVQRVVDILAGVLNAGYFRSDSPVCSTDINLVEVWPSKKDVGHMYDFIAYYVAYG
QATVSKDILSQILQYLTSEVNISDTLSENTTNIFRRREKQLLSLIQVVPGTQWDAPYLLQ
LSEKAQFHQVCGYIHAISHQLVAAMDSYIKATQEPIHAFSFIYDMLRQLGNAESDAFESA
VISRVPDLVKLSREATYLLITDHFSGRTSYILSELRSHPESLFLYLKTAIEVQTTGTLDI
SCLQNVDTLDFPSARNARLQSNGVQAYLEAISTSLKLIHNNRVNVTDELMELYFELLCRF
DRKSVLKFLETSESYRVEHCLRLCQEYDITDAASFLLERVGEVGSALLLILSHLGQKFVM
LDAEIQKAFSCTVVVVDNLNELMKKKVVAEILDIVHACIGLCQRNSPRLQPEESECLWFQ
LLDSFFEPLLDAENATGSISPEEGAQTLNWKVSKYGKCAHMMRKLFSIFIKEIVEGMIGY
VRLPRIMLKLLSDNGNQEFGDFKLTILGILGRYDFERRILDTAKSLIEDDTYYTMSLLRK
GASHGYSPRSLVCCICGSLLAKNSLDSTIQVYSCGHATHLHCQLQEDRTSFSGTLVGCPI
CTPGRKTQRSSGMHTLAENGLVSSIPSSMQQRSTPLLHLHDHECGDNSFSPHPSRFELLH
SLEKDQKYFQMENTPQLKLAPPALYHEKVKKGIDDLTGGSTSRVSTTEKPRSKQLRDVKL
KGSSLRFPLKSSIIFTKEKIRKR
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggagtattcaattgcagtggatgtggatatggatctcgactcacttcttcaatcgcac
ggcggcgaaaccgattccgatgaagaagatcgtcaccgccgcaccgtcgacgaaatcctc
ctcaaccattcatcttcctccccttctcctccttcttctccttctttccctctcaacggc
gacggtgatgatgacaacaacgtctcggctacttcgagagaccacagactatcgaattca
cactccattcctctggtagagtcccataactatagatacaattcagctaccaacagtagc
agagttaactacgcggctagggttttgccgccgttatttggtaatggtgccgtcagatct
aatgcgaagcctggggctgcactggccgccgctgccgctgcctctcgatcaattcccacg
ccccacgccaccgccattaagctgagaagagcaaatacggccgttccctctcttcagagc
tcgctttctgaaactgcggaaaatattgatagtgccaattcgtcactatcagctgcgcct
tcatctcactttcatctcagtcagtctcaagaagaagaaggagttcaacttcctctggga
aatatccattcagactccacggatgatgatgatgctgatggtggtatcgatcacggggca
tattcccctgaagataggcatcaacacaagtctcgtgaggacgcgactctcaaggtatct
tacgaggatgaaatttcaagagctgacaaggatgctgaatgcacttctattattgaaagt
gaaaaggatcaaattcctgtaattgagcaattctcgtcgccttcgatcggtgaaaagaat
gagcaatgtgctgaagttagagctgctggtgaatatggtgatatggctttacccagccct
gcttcgagtggtgttgatcataaggaagatataagtggaggagaagtagcaagtaattct
gaaaacactgtggctgaacctggggattgtgattatactagtggacataatgacgctgca
gaattacttgaagaattggtttcacaaggggaaggcgatgacaactatacaaagttgcag
cagaaatctgaatcttcagtaaagccacttgacttggctgaagaaattgagaagaaacat
gcatttacaggtttgcactatgaagagggtgcagctgcacagccaatgaggcttgagggt
gttaaaaggggctctactgtgttaggctactttgatgttcgttctgacaacgttgttacc
ccgaccatctcatcgcaaacctttcggcaagatcatggatccccacaagttctgtctgta
catttgaactacattgcggtgggaatgtcgaaaggatcaatttttgttgtgcccagcaag
tatactgcgcatcatgtcgataacatggatacaaagatgacgtcccttggtttgcaaggg
gatagatctcatgtccctgtaacttccatgtgcttcaatcagcaaggagatatactcttt
gcaggatatggtgatggtcattacactgtttgggatgtgcagaaggcctcagcactcaag
gttatcactgaacatagagctccagtagttcacatgctatatctgggccaagatactcaa
gttactcgtcaatttaatgtggttagcggtgacagcaagggtgtggtcaagttgattcga
ttttctgtggttccatggctcaataggatatcttatacaaaatctatgaaacttttagat
gaaactactagcagagtagtatgtgcttctccattgctatacaacgaaggatatgggggt
gcaatgctgtcttcgcagagtagctccgcagtttctactagtagtattagtagcatgatg
ggtggcatggttgatgaaggtgttgtcatatttatcacgcatcagtctgctcttgtggca
aaagtcattcccactgtggaagtatatgctcaaattcccaaaccggatggcgtcagggag
ggctccatgccgtatgctgcatggagatgtatgtcacaatcgctcagttcatcctctgaa
aatgctcttgttgaggcgtcagataaagcttcattgcttgccattgcgtgggaccagaag
gttcaggttgctaagctattaaaatcagagttaaaagtgatagaaaagtggactcttgaa
agtgccgcagttggtctggcatggttgggagatcagatgttggccatcctcacatcgaca
gcacacctctgtttgtatgcaaaagatggaaatttgatccaccagattagcttttccgtg
gatggctttcaaggggataatttgatttctcatcatatatattttactaattcttttggg
aaccctgagaaagcttatcacaacagtatttcagttaggggtgctactatatacatcctt
ggacaggagcatctcattgtttctcgccttctctcatggaaggaacggattgaagttctg
cgaaaagcaggtgactggattggtgccttaaacatggcgatgtcactttatgatggccaa
tcacacggtcttgtagatcttcccaaaaacttggatgacttacaaagaactgttatgcct
tatcttgcggaattacttcaggcatatgttaatgaggtattttcttacctatctgttgcc
tgttacaaccaaaatacaaaggtggaccagtcaaatgagattaaggagcaatacatccgt
gttggtggtgttgctgtcgaattttgtgtgcatatcaggagaactgacatcctgtttgat
gatataatgagtaaatttgatgaggctcaacaaaaagagacattcttggaactcttggag
ccatacattttaaaagatatgctgggatcccttccacctgggatcatgcaagcattagtg
gagcactatagcaagagaggttggttgcagcgaattgaacagtgcgtcctgcacatggat
atattgtccttggattttaatcaggttgtccgcttatgcagggaacacaggttggattgt
gcgttgatatatttgtttaacaaaggtttagatgattttaggacaccgcttgaggagctc
ctgctagtattacgagatagcacaagagaaaatgccacttccctcgggtacagggtgctt
gtctacctgaagtattgcttccagggtcttgcttttcctccaggacatggaaatctttct
cctctgcgtgtgacctctctcagaaaagaactcctagatttcctattagaggattcaagt
gctccaaattcgtgggctgttacaagtttatcatctagcgaagcctatgcgaacatgctt
catcttttagaattggataccgaagccactctgcaggttttaaaattggcttttgtagat
gttgaactatctacttcgggccaaccttcggaggaagcaactaatatcaacatggagcca
gatgaaagtgataaattggtccaaagagtggtggatattcttgctggtgttcttaatgcc
ggttatttcaggtctgacagtcctgtctgcagcactgatataaatttggttgaagtttgg
ccttcaaaaaaagatgtaggccacatgtacgattttatagcttactatgtggcatatgga
caagctactgtctctaaagatattttgagtcaaatcttacaatatttgacttcagaggtc
aatatctcggatactctgtcagagaatacgactaatatcttcagaaggagagagaaacaa
ctgctctctctgatacaagtggtgcctgggactcagtgggatgctccttatttgttgcag
ttgtctgagaaggctcagtttcaccaggtctgtggctacatacatgccatcagtcatcaa
ctagttgctgctatggacagttatataaaagcaacacaggagcccatacatgcattctct
tttatctatgatatgttaaggcagcttggtaatgcagaatctgatgcttttgaatcagct
gttatttctcgcgttccagatcttgtcaaactgagcagagaagcgacttaccttctaatt
actgaccatttttccgggagaacttcttatattttgtctgagcttcggtctcacccggaa
agccttttcctttatctaaagactgccattgaggtccagacaactggtacccttgacatc
tcttgtttacaaaatgttgatactctagattttccttctgcaagaaatgctaggctgcag
tcgaatggtgtccaagcttatctggaagcaatatctacttccctgaaacttatacataac
aatcgagttaatgtgactgatgaattgatggagctgtattttgagcttttatgtcgattt
gatcgcaaatcagttctcaagttcttggaaacttctgaaagctatagagtggaacactgc
ttacgtttatgccaggaatacgatataactgatgctgcttcattcttgttagaaagggtt
ggagaggttggaagtgcccttcttctaattctttctcatctcggtcagaagtttgtcatg
cttgatgcagaaatccagaaagcattttcttgtactgttgtggttgtggataacctaaat
gaacttatgaagaaaaaagtggtagctgaaatacttgatattgtccatgcttgtattggg
ttatgtcagagaaatagtcctcgtctgcagcctgaagagtctgagtgcctctggtttcag
ttgcttgattcgttttttgagccattgttggatgccgaaaatgctactggatcaataagt
ccagaagaaggggcgcagacattaaattggaaggtttccaagtatggtaaatgtgctcac
atgatgaggaaactgttctccattttcattaaagaaattgttgagggaatgattggatat
gttcggctcccacgaatcatgttgaaacttctttctgataatggcaatcaagaatttggt
gattttaagcttacaatactgggaatacttgggagatatgattttgaaagaagaattctg
gatactgcaaaaagtttgattgaggacgatacttattatacgatgagtttgctcaggaaa
ggagcttctcatggttattcccctaggagccttgtttgctgtatctgtggctctctcctt
gctaaaaattctctggattctaccattcaagtatatagttgtggtcatgcaacacatctc
cattgtcaacttcaggaagacaggacatcatttagtgggaccttagtaggatgtcccatt
tgtactccaggaagaaaaactcaaaggtctagtggcatgcatacacttgcagagaatgga
ttagtgagtagcatcccatcaagtatgcagcaacgtagcacacctcttttgcatcttcat
gatcacgaatgtggagataactccttcagcccccatccatcaaggtttgagctcttgcat
agccttgaaaaagatcagaaatactttcagatggaaaacacgcctcaattgaaacttgca
ccgccagctctttaccatgaaaaggtaaaaaaaggaattgatgacttaacaggaggaagc
acgagccgtgtttctacaacagaaaaaccaaggagtaagcaactcagggatgtgaaattg
aaaggatcatcattgcgattccccttgaaatcgagtattatattcaccaaggaaaagatt
aggaagaggtaa
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