Salvia miltiorrhiza (redroot sage): 130997335
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Entry
130997335 CDS
T09291
Name
(RefSeq) uncharacterized protein LOC130997335 isoform X1
KO
K24155
rabconnectin-3a
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130997335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smil04131
]
130997335
Membrane trafficking [BR:
smil04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130997335
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
130997335
RAVE complex
130997335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
Sec6
Motif
Other DBs
NCBI-GeneID:
130997335
NCBI-ProteinID:
XP_057778603
LinkDB
All DBs
Position
8:26616198..26631379
Genome browser
AA seq
2496 aa
AA seq
DB search
MAEATRPPPPPLDVASRLPLHLIKSEIIPPAPSRSGSGSAAAADFLLDFAGHSWIAYGAA
SLVVISHFPDPQSEAETRIGPIYRQVIELSREADAHVSAVCWSPATPSVGELAVALGDRI
VLLSYSEDENSTSSFCWRQTTMLILSMKVEAIQWTGSGDGIISGGTDVVMWRRKEKSWEI
AWSFKPKIPQALVSTTWAAYGLSATAPCSEVQIGGSSALPNDARDCVLVFQFDGHSKYPQ
HELRHPMPVGMIQWRPSTGKPSSKHARHAQRSVLLTCCLDGAVRLWGEIDDGRIRRNVKD
NNDQKAKLSFCVLAVIEVSQTLNGILGSDVFVSWAMDVEGVMVNDKEVCYYSCSDNLQHD
TASRCEWLIGFGPERVITMWAIHCLDDFAPVRFPRVTLWKMQDLISSVMEASQLLMHKVC
IMRTQVSGSPALCSLVQLSPCNSFSWWQLYSQTSASIEWESSSENHAKSTSAACAKGVVE
VEGHSSTILQIAIHPFSFETELAASLDRNGILLFWSFSTFFNSHIGRPISTPSWKFCGKP
AVIDHSPKYTCLSWAPTVLGDNNVLLMGHSNGIDCFVVKILKNNEQKITYHSLFSLPFVI
EGHEQGLTRVSSIPLPCNCNGNSVSSKFLLIALWMDSFKALSWEITIHCDDSQGSCSNEH
WKTFESYLSGKKYLVAVDPSSSIIPLTNNDDKVTSCAVVCPSDLISSSKQKLSSADEIGS
TCYAYHMITGCFNGSLKLWRSMPVDSLISEKKWALVGLLTSQQGPILNVTMSPCGQKIAS
ASKTSQLNYSTILCIWECMHVKGVGSFMLEDKLCFDGEIVAFNWLKLGIGQLLLAVCLRN
ELRIYASRRRGGQGVLKSKKPLEENAWICIAANSNLPPISDFLWGPKGTAVVVHGKYFSL
FSHFLSLSDCTGSHDSVHCPTFTDSKRVPSSIGGKYESQPPAKMDNEDELNSIVNGESCQ
WMYNYATKKCFWSMSEIAEMIGGSLPLFHPEALLNNLCSGNWKRAFIALRHLVKHLASAS
LSEQGHGAKLPSSLVSPVPLADYLEGILPIHSSDNVFHWSTSQLQTGLFNFVPGDGSGAQ
NSTMTSSLSKSEFDVFIESLEMLYSYKRINIDEKMQAIALIGLLREVGNANSTSAYGSLD
EPGRRFWVAVKFQQLYFAQRFSRLPLVEEFVVSPGLIGWAFHSDCHDNLFNSLLSTEPSW
EEMRSMGVGFWYTNVSQLRVKMEKLARQQYMKKKDPKACLLLYIVLNRLQVLAGLFKISK
DEKDKPLAGFLFRNFQDDKHKAAAIKNAYVLLGKHQLELAVAFFLLGGDASSAVTVCAKN
LGDEQLALVICRLLEGCGGPLERNLIVKFLLPSALSIGDFWMASFLEWLLGNYAQSFFRM
LGAEVDSEVNISVLSSSHTCFLDPSIGQYCLMLATKTKLKNAIGELNAANLCRWASLMNI
TSFRRCGLPLEALECLLSSVSIFGGSTSTHGSFKHNPTGDLPAELTKPSMYENSSNWMSE
ETSSHIVSNCKLYLALQYMSALMKEHPSCLENDRPSSFKEVINLEVDRQNFEKLLKEFED
KLTGAIAYFQQKFSLVPLHLITMIVSSLCHNGLDFVGHYILQGYAPKFLSQEKSNGPDKL
FWFPSDLFKATEEMFSLYVKYVVASCKNCSRSTYLTVDSLASEGRLCWLTVWGLSNQGIT
ETFRCLRAMLQLFLGSQAVDFQKLLLFILSLFEYHILFASAWLQKNFKAIIVSIGPVLSN
LLEESNSYGLKMEDLNKLITEIMEMLARDLVYVESGPHTEITGLKQEPTGAVSDNKAWRI
ITASFWVHMSKFLEHQLTTLPEVPEVIFSSQPFHVLELDGNNLQQQARSASSTLVQFLKL
TCSYVSFYCSKQFATYLLQEANTLNKNNLSCFEDGLYQPEGGNNHPMIEYPEPLDKVKEL
PDLEKLRHIFAGSKILRGAFQQEYRNWLPYIKQKSSSGWSYAYASITAEFGSEETWDKED
GFGSPRAIGSPLACLTPDHPFKTSDDHDSYDPKRVMPFQNPKEVCRRNGELLEALCINSI
NQSQAALASNKKGIVFFNWEDGIPDRYKAECIWGEADWPRNGWAGCESTPVPSYVSSGAS
LGSKKGTHLGLGGATIGTGSLARPGGELTGGGAFGIPGYAGMGASSLDWGLQESFDEFLD
PPATIDNIRTSAFASHPCRPFFLVGSSNTHIYLWEFGKDTASATYGVLPAANVPPPYALA
SVSAARFDHCGHRFVTATLDGTVCTWQLEVGGRSNIHPTESSVCFNNHTADVTYVTASGS
IIAAAGYSSNGVNVVVWDTLAPPATSQASIMCHEGGARSLAVFDNDIGSGSVSPLILTGG
KGGDVGLHDFRYIATGRTKKHKHLDPGEHNMNASSSVDMRSKTGDQNRNGMLWYIPKAHS
GSITKISTIPNTSFFLTGSKDGDVKLWDAKRAKLVFHWPKLHERHTFLQPSSRGFGGVVR
AAVTDIQVVSNGFLTCGGDGIVKYVGFQGSPLKTTN
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctactcgtcccccgccgccgccgctcgatgtcgcctcccgcttaccgctc
cacttaatcaaatccgagattattccgcccgccccctcacgatccggctccggatccgcg
gcggccgccgatttcctgctcgacttcgccgggcactcatggatcgcctacggcgccgcc
tctctcgtagtcatatctcacttcccagaccctcaatcagaggccgaaacgagaatcggg
ccgatatatcgtcaagtgatcgagctatctcgagaggccgacgctcacgtctcagccgtg
tgttggtcccctgcgacgccgtccgttggcgagctcgcggtggcgttgggtgatcgcatt
gtgttgctatcgtatagcgaggatgaaaattcaaccagttctttttgttggaggcagact
acaatgcttatcttatccatgaaggttgaggccatccagtggacaggttcaggagatgga
ataatttcaggaggcactgatgttgtaatgtggagaaggaaggagaagtcatgggaaata
gcttggtcattcaaaccaaaaatccctcaagctcttgtctctaccacctgggctgcctat
ggtctttcagctactgcaccatgcagcgaagtacaaattggaggttcgtctgctctcccc
aatgatgcaagagattgtgtattagtttttcaatttgatgggcattctaaatatccacaa
cacgagctgcgtcatccaatgcctgttgggatgatacagtggaggccatcaacgggaaaa
ccatcaagtaagcatgctaggcatgcccagaggtcagtcttgttaacttgctgccttgat
ggagctgttagattatggggtgaaattgatgacgggaggattagaagaaatgtaaaggat
aataatgaccagaaagcaaagttatctttttgtgtccttgctgtaattgaggtaagccaa
accctgaatggtattctaggctctgatgtctttgtaagctgggcaatggatgttgaaggc
gtgatggttaatgataaagaagtgtgctactattcatgctcagacaatcttcagcatgat
acagcttctagatgtgagtggttaattggttttggtcctgaaagagtgataacgatgtgg
gctattcactgtcttgatgattttgctccagtgagattcccgagggttactttatggaag
atgcaggatctaatcagttctgtaatggaagcaagccaattgcttatgcataaagtttgt
atcatgaggactcaagtttctggctctcccgctctttgctcgctggttcaattgtcacct
tgtaattcgttctcttggtggcaattatattctcaaacctcagctagcatagaatgggaa
tcttctagtgaaaatcatgccaaaagtacttcagcagcttgtgccaaaggagtggtagaa
gttgaaggtcacagcagtacaattttacaaattgcaattcatcctttttcttttgaaact
gaacttgctgcctccttagatagaaacggaatacttcttttctggtcattttcaaccttt
ttcaatagtcatataggccggccaatatctactccctcttggaaattctgtggaaaacct
gctgttatcgatcactctcctaaatacacatgcttgagttgggcccccacagtgctaggt
gacaataatgttcttctcatggggcattcaaatggcatcgattgctttgtggttaagatt
ttgaaaaacaatgaacagaagatcacttatcacagtttattttctttgcccttcgttatt
gaaggccatgagcaagggctaactagagtgagctccatccctttgccttgcaactgtaat
ggaaactctgtttctagtaaatttctgctgatagcattatggatggacagttttaaggct
ttatcatgggaaataaccatccattgcgatgattcccaggggagctgttcgaatgagcac
tggaaaacatttgaaagttatttgtctggtaagaagtacttggttgcagttgacccttcc
tcatcaatcattcctttaactaacaacgatgacaaggttacaagttgtgctgtagtctgc
cccagtgacttgatttcatcttcaaaacaaaagctgagttctgccgatgagattggcagt
acttgctatgcatatcatatgataactggttgcttcaatggcagcttaaaactgtggagg
agcatgccagttgattctttgatctcagaaaagaagtgggctcttgttggtctccttact
tctcagcaaggacctatactaaatgtcactatgagtccctgtggtcaaaagattgcttca
gcctccaaaactagtcaactgaattattctaccatactttgcatatgggaatgcatgcat
gtaaaaggtgtgggcagcttcatgctggaagataaactatgttttgatggggagattgtt
gcttttaattggttaaaactgggaattggtcagctattacttgctgtttgtttacgaaat
gagttgcggatatatgcttcacgacgccgtgggggtcaaggcgtattaaaatccaagaaa
cctttggaagaaaatgcttggatatgcattgcagctaatagtaatctacctcctatttct
gactttctttggggccctaaaggcacagctgtagtagttcacggcaagtattttagtctt
ttcagtcactttttgtcattatctgattgcactggctcccatgacagtgtgcattgtcca
acttttactgattctaaaagagtaccatcgagcattggaggcaaatatgagtcgcagccc
cctgcaaagatggacaatgaggatgaattgaactcaatcgtaaatggcgagagctgccag
tggatgtacaattatgccaccaaaaaatgtttctggagtatgtcagaaatagcagaaatg
ataggaggatctttgcctctatttcaccctgaggctctcttgaataacttgtgttcaggt
aactggaaacgtgcatttatagctttacgccatcttgttaaacatctagcttctgccagt
ttgtctgaacaaggtcatggtgctaaattgcctagcagtttagtttcaccagttcccttg
gcagattatcttgaagggattcttccaatccattcaagtgataatgtatttcattggagc
acttctcaacttcaaacgggtttatttaactttgtccccggggatggttctggtgctcaa
aattccaccatgacttcatcgctatcaaaatctgaatttgatgtcttcattgaatctctt
gagatgttgtactcttataagcgcataaatatagatgaaaagatgcaggccattgcactc
attggccttctacgagaagttggtaatgctaactcaacttctgcttatggaagtctagat
gaacctggtaggagattttgggttgcagtgaagttccagcaactatattttgctcaaaga
tttagtaggttgcctctggtggaagagtttgttgtttctccaggactgattgggtgggct
tttcattcagattgccatgacaatttgtttaattcgctactatcaacagagccatcttgg
gaagaaatgcgcagtatgggtgttgggttctggtatacgaatgtatcacagttgagggtt
aagatggaaaagctggctagacaacagtatatgaagaagaaagatcctaaggcctgttta
ctcctttatattgtgttgaacaggcttcaagttttggctggcctcttcaaaataagcaaa
gatgaaaaggacaaaccattagcgggatttctctttagaaactttcaggatgataaacat
aaggctgcagctattaaaaatgcttatgttctattgggaaaacatcaactagagttagca
gtagctttctttttgcttggaggagatgcttcttcagccgtgacagtctgtgccaaaaac
cttggagatgaacagcttgctcttgtaatatgtcgtctcctggagggatgtggtggacct
ttagaacgcaatctcattgtgaagtttctcctcccatctgcactatcaataggcgacttt
tggatggcaagttttctagagtggctattgggaaattatgcccaatcttttttcagaatg
cttggtgctgaagtggattctgaggtcaatatttctgtcctttcatcttctcatacctgt
tttctggatccaagtattggtcaatattgcctgatgttggcaaccaaaactaaattgaaa
aatgctattggggagcttaatgctgctaatctctgtcggtgggcatctctgatgaatatt
acttccttcagaagatgtgggctacctcttgaagctttggagtgccttttgtcatctgtt
agcatatttggtggctctacctctacccatgggagcttcaagcataacccaactggcgat
cttcctgctgaattgacaaaaccatctatgtatgagaactcctcaaactggatgtcggaa
gagacatctagccatatcgtatcaaattgcaagttatatttggcattgcagtacatgtca
gccttgatgaaagaacatccaagctgtttagaaaatgataggccatcatctttcaaagag
gttataaacctggaggttgaccgtcagaactttgagaaattactgaaggaatttgaagac
aaattgacaggagctattgcatattttcagcagaagttctccttggttcctcttcattta
attactatgattgtatcatctctgtgccataatggtctagactttgttggacactacata
ttacaaggttatgctccaaagttcctgtcgcaagaaaagagtaatggacctgataaatta
ttttggtttccatccgatctgtttaaagctactgaagaaatgttctcactgtatgtgaaa
tatgttgttgcctcttgcaaaaactgctccagatcaacatatttgaccgtggatagtctt
gctagtgaaggcaggttatgctggcttactgtttggggtttgtccaatcagggcataaca
gaaacatttaggtgcctgagagccatgttacagttgttcctaggatcccaagccgtagat
tttcagaagttacttttatttattctcagtttgtttgaataccatatactttttgcttca
gcttggcttcaaaagaatttcaaagctattattgtatctattggacctgttctgtctaat
ttactggaggaaagtaactcctatgggttgaagatggaggacctgaataaacttattact
gagattatggagatgcttgctcgtgatttagtatatgttgagtcaggaccacatactgaa
atcacaggactaaagcaggaaccaactggagcagtttctgataacaaggcctggcgtatt
atcactgcttctttttgggtgcacatgtctaaattcttggaacatcaactcactacattg
cctgaagtacctgaagtaattttttcttcccagccttttcatgtattagaacttgatgga
aataatctacagcaacaggccagatcggcctctagcactttggttcaatttctaaagctc
acgtgctcatatgtttccttttattgttcaaagcaatttgcaacatacctgcttcaagaa
gcaaatactttgaacaaaaataacctttcatgctttgaagatggtctgtatcaaccagaa
gggggcaataatcatccaatgattgaatatccagaaccgttagacaaagtcaaagagttg
ccagatcttgagaaattaaggcatatttttgctggttccaaaatcctccgtggagccttt
cagcaagagtatcgcaattggctaccatatattaagcagaagtcatctagcggatggagt
tatgcatatgcaagcatcacagcagagtttggatctgaggaaacttgggataaagaagat
ggatttggtagtcctcgtgcaattggatcacctttagcatgtctgaccccagatcatcct
tttaaaacttctgatgaccacgattcatacgatccaaagagggttatgccttttcaaaat
cctaaagaagtatgtagaagaaatggagaacttttggaggctctgtgtataaactccatc
aatcagtcccaagctgcacttgctagcaataagaaggggatagtatttttcaactgggaa
gatgggattcctgatagatataaagctgaatgtatttggggagaagctgactggccccgt
aatggctgggcaggatgcgagtccacgccagttccttcatacgtttcttctggtgcgagc
ttgggaagtaagaagggtacacaccttgggttgggaggagccacaattggtacgggctcc
ttggctagaccaggaggagaattaacaggtggtggagcctttggcattccaggatatgct
ggaatgggagcatccagccttgattggggtctccaagaaagttttgatgagttcctcgac
ccacctgccacaattgataatataaggacaagcgcatttgcatcacatccatgcaggcct
ttcttcttggttggatctagcaatactcacatatacctttgggagtttgggaaggacaca
gcctctgcaacctatggagtacttccggctgcaaatgttcctccaccctatgctcttgcc
tctgtgtctgctgcacgatttgaccactgtggacacagatttgtgactgccacattagat
ggaactgtatgcacgtggcagcttgaagtgggaggaagaagtaacattcatcctacagaa
tcttctgtctgctttaacaatcatactgcggatgtcacttatgttacagcaagtggatca
attattgctgcagcaggatacagctctaatggcgttaatgttgttgtatgggacacactt
gctcctccagctacgtctcaagcttcaataatgtgtcatgaaggaggtgctcgctccctt
gctgttttcgataatgacatagggagtggttctgtttctcctcttattttaactggtgga
aaaggtggtgatgttgggcttcacgacttccgttacatagctacaggaaggactaagaaa
cacaagcacttggaccctggggaacataatatgaatgcttcatcttctgttgatatgcga
agcaaaaccggtgaccaaaataggaatggaatgctttggtacattccaaaggctcactca
gggagtatcaccaaaatatctacaattccaaataccagtttcttcttgactgggagcaag
gatggagatgtgaagctttgggatgcaaagagggctaagttagtatttcactggccaaaa
ttgcatgaaaggcacaccttcttgcaacctagctctcgtggttttggtggagttgttcgg
gctgcagtaacagacattcaagttgtttctaatggcttccttacatgtggaggagatggt
attgtaaaatacgtaggatttcaaggatctccactgaagacgacaaattaa
DBGET
integrated database retrieval system
