Salvia miltiorrhiza (redroot sage): 130997558
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Entry
130997558 CDS
T09291
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smil03016
]
130997558
Enzymes [BR:
smil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
130997558
Transfer RNA biogenesis [BR:
smil03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
130997558
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
130997558
NCBI-ProteinID:
XP_057778901
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Position
8:complement(29604189..29612591)
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AA seq
795 aa
AA seq
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MAVRLMNGGSAIFRCCAVSPPPTALRCCLRHHKHVPLHSSACLSISRRLRCRRISFGYEA
VRRYSAQSLVDMMMEELESLRKRGVARASNKLELETSDELLEDKPGKKTLQKGLLLEFKK
DSERVLLAVVQKPDGKKNWMVSDQNGVMASIKPQQITFIVPGVKNFDHMEISDFIQKAQD
NLDPSLLEFAWIELVEKNKSITVEELAEMMFGSAEPLESYSAHLLLSKDDIYFTTLESKG
SCSVYGPRPAVQVEELMRRKHAKEAADRELEEFVNLLRSARDMPLHAKPPKSMWSSEEKN
QKKIEILQAYAIDDCRNDDEKKTAGMILKGVGLARTASAAMNLLIDIGYFPVHINLDILK
LNIHTDYAEEILIAAERLLLESPDPDEAERKDLTHLKVYAIDVDEADELDDALSATRLQD
GRIKIWIHVADPTRLVQPGSIIDKEAMKRSTSVFLPSATYPMFPEKLAMEGMSLKQGEHC
KAVTVSVVLHGDGGIAEYSVENSIIKPTYMLTYESATELLHLNLEEEAELRLLSEAATLR
FQWRRRQGAIDTSTLEARIKVTNPDDLEPLIKLYVENQADPAMRLVSEMMILCGEVMATF
GSLNKIALPYRGQPQSNIDISDFVHLPEGPVRSSAIVKTMRAAEFDFRKPTRHGVLGLPG
YVQFTSPIRRYMDLLAHYQVKAFLRGDSPPFSAGQLEGMASMGNMNVRLVRRLSSSSLRY
WMIEYLRQQPKEKKFSALVLRFIKDRVAAILLVEVGVQGSAWVSLGVQVGDEVKVLVEEA
HPRDDVLIFKEAQGI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgcctcatgaacggcggtagcgcaatcttccgctgctgcgcagtgtcgccg
ccgcccaccgccctaaggtgctgcctgcgccaccataagcatgttccgttgcactcctcc
gcttgcttgtcaatttcccggcgacttcgttgtcgccgcatatcatttggctatgaggcg
gttcggaggtactcggcgcagagtctggtggatatgatgatggaggagctggagtcactc
cggaagcgcggtgtagctcgcgcctcaaacaaattagaattggaaactagtgatgagctt
ctcgaagataagcctggaaagaagactcttcagaaaggattgttgctagagttcaagaag
gattcagagagggtcttactagcagttgtgcagaaaccggatggcaaaaagaactggatg
gtttccgatcagaatggtgtaatggcatctattaagccgcaacaaattactttcattgtc
cccggtgtcaagaactttgatcatatggagatatcagactttattcagaaagcacaagat
aatctggacccttctctgcttgaattcgcatggattgaacttgttgaaaagaataaatca
ataactgtggaagagcttgcagagatgatgtttggtagtgcggaacctctggaaagctat
tctgctcatttgttgctctcgaaggatgatatatacttcacaacactggaatctaaaggt
tcatgttctgtttatgggcccagacctgctgttcaggtcgaagaacttatgcgcaggaag
catgccaaagaggctgcagatagggaacttgaagagtttgttaatttactgagatctgcc
agggatatgccgcttcatgcgaagcccccaaagtccatgtggagctctgaagagaaaaat
cagaaaaaaattgagattcttcaagcatatgcaattgatgattgtaggaatgacgatgaa
aagaagactgctgggatgattttgaagggcgtaggacttgctagaacagcatcagcagca
atgaatctcctcattgatattggttatttcccagtgcacattaatcttgatatattgaag
ctcaacatccatactgattatgcagaagagattcttatagctgccgaaagacttttgctc
gagtcacctgacccagatgaggctgagagaaaagatcttactcacttgaaggtttatgcc
attgatgttgatgaagctgatgagctcgatgatgcactgagtgcaactaggcttcaggat
ggccgtataaagatctggatccatgttgcagatcctacaagattggtccagcctggaagc
attatagacaaagaggcaatgaagaggagcacttctgtttttttaccatctgctacttac
ccaatgttccctgagaagttagccatggaaggcatgagtttgaagcaaggggagcactgc
aaagctgtcacagtgtcggttgtgctgcatggtgatggtggcattgcagaatattctgtt
gaaaactcaatcatcaaaccaacatatatgttgacttatgagagtgcaacagaactcctt
catttgaaccttgaagaggaggctgaacttagacttctttcagaggctgctacactccga
tttcaatggcgtcgaaggcagggtgcaatagacacatctacattagaagccagaatcaag
gtgactaatccagatgatctagagcccttgatcaagctgtatgtggagaatcaggctgat
cctgctatgcgtcttgtatctgagatgatgatactttgcggcgaagttatggccactttt
ggttctttgaacaaaatcgccttaccttaccggggacaacctcagtcaaatattgatata
tctgattttgttcatcttcctgaaggcccagtaaggagttctgctatagttaaaaccatg
cgtgctgctgaattcgatttcaggaagcctacacgtcacggagttttaggacttcctgga
tatgtccaattcacatctcccatacgtagatatatggatctactggctcactatcaggta
aaagcttttctcaggggagattctcctcctttctcagcaggacagctggaggggatggca
tctatgggaaatatgaatgtgaggttagtgaggcggcttagctctagcagtctccgttat
tggatgatagaatacctgaggcagcaaccaaaagaaaagaagttttctgcattggtccta
cgatttatcaaagatagagttgctgcaatactcttggtggaggttggagtacaaggttct
gcttgggtatctctcggtgtacaggtaggcgatgaagtaaaagttcttgtagaggaagcg
catccacgtgatgatgttcttatattcaaggaggctcaagggatttag
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