Salvia miltiorrhiza (redroot sage): 130997624
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Entry
130997624 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130997624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smil03041
]
130997624
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130997624
Spliceosome [BR:
smil03041
]
Complex A
U2 snRNP components
U2 related factors
130997624
Complex B
130997624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-GeneID:
130997624
NCBI-ProteinID:
XP_057778992
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All DBs
Position
8:complement(30880101..30884661)
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AA seq
1147 aa
AA seq
DB search
MEEPKSKSRREGSENEEVKVSHHREDRKREKERNGERHKDRDRDRDRDRDRDSRHEREKS
VDDKHRDREKHKSKRRDKEQEQERARNHDDERPRDKAKGREKDKDDREVDRDREDREKEK
ERGRDRDRGRDKEREREKERERERERHVERERERERERRERARDRERERKERERKHEKEK
RRDRDRSHSSDEDVKDHERKKRKKEEDHQTRDSEQNSKANRHRDGSEDNSSRKKGDGDSE
DKKEKSWGGDLAEEQQRLDDEMEKRRRRVQEWQELRRKKEESEIEKLGVPVTHEPESGKT
WTLEGESDDEEAGPQERETMDVDEDEDGTVKPVGEDGNGMSIDSVNEAAPTTQSVGDNAV
DDEEIDPLDAFMNSMVLPEVEKLNNVVPPTSNDSGPELVERNGKINSENTKRGKSKSMGR
IIPGDNSDSDYGEIENEEDPLEEEDDEEFMKRVKKTKVEKLSIVDHSKIDYPSFRKNFYT
EVKEISRMTSEEVAAHRKQLELKIHGKDVPKPVKTWHQTGLATKILDTIKKLNYEKPMPI
QAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMSGDGPIGLIMAPTRELV
QQIHSDIKKFTKVLGLSCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKIT
NLRRVTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKP
VELQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWYEKGKILIFVHTQEKCDALFKD
LLKSGYPCVSLHGGKDQTDRESTLADFKSNVCNILIATSIAARGLDVKDLELVVNFDVPN
HYEDYVHRVGRTGRAGKKGCAITFISEEDARYGPDLVKALELSEQSVPEDLKALADGFMA
KVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAG
GDISHQAALAQALASATKASAAAASVTAPMTSGQLIQNGGGVASAVVPGGGMQTGGNDAA
AKAAALAALMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGA
AITTRGQYYPPGKIAGPGERKLYLFIEGPTEQSVKRAKADLKRVLEEITNQASSLPGSAQ
PGRYSVV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacctaaaagcaagtctaggagggagggctctgaaaatgaggaagtgaaagta
agtcaccatagagaggatcgaaagcgtgaaaaagagaggaatggtgagaggcacaaggac
agggacagggacagggacagggacagggaccgcgatagtcgccacgagagagaaaagagt
gttgatgacaagcacagggacagagaaaaacacaagtcgaagcgtcgtgacaaggaacaa
gaacaggagagagccaggaaccatgatgatgagaggcctagagacaaggctaaaggcaga
gaaaaggacaaggatgatagagaggtagatagagatcgggaagacagggaaaaagagaag
gaaaggggaagggatagagatagagggcgggataaagaaagagagagggagaaggaaaga
gagagggagcgggagaggcatgtggagcgagaaagggaaagggagagggagagaagggaa
agagctagggacagagagagagaaaggaaggagagagagaggaaacatgaaaaggaaaaa
cgtcgagacagggataggtcacacagtagtgatgaggatgttaaagaccatgagagaaaa
aagcgcaagaaagaggaggatcatcaaaccagggattcagaacaaaatagtaaggccaac
cggcatagggatggcagcgaagacaatagttcacggaagaagggagacggagattcagaa
gataagaaagaaaagagttggggaggagatttagctgaagagcaacagcgattggacgat
gagatggaaaaaaggagaaggagagttcaggagtggcaagagctgagaaggaagaaagag
gaatccgagatagaaaaacttggggtgcctgttactcatgaacctgaatctggcaaaact
tggacactggaaggggaatctgatgatgaagaagctggtcctcaggaaagagaaacaatg
gatgtggatgaggatgaggatggaactgtgaagcccgttggagaggatggaaatggcatg
tctatagactctgtgaatgaggcagctcctaccacgcaaagtgttggagataatgctgtt
gatgatgaagaaattgaccccttagatgcgtttatgaattctatggttttacctgaagtt
gagaaactaaacaatgttgtgcctccgacttcaaatgactctggtcctgaattagttgaa
agaaatggtaaaataaactcagagaacactaaaagggggaagagcaaatctatgggaaga
attattcctggagataactctgattcggactatggagaaattgaaaatgaggaagatcct
ttggaggaggaagatgatgaagaattcatgaaacgggtgaagaagaccaaggtggagaag
ctttcaatagttgaccattcaaaaattgattatccttccttccgcaagaatttctacact
gaagtgaaggaaatttccaggatgacatctgaggaagtggctgcgcataggaaacaactg
gaattgaagatacatggaaaggatgtacctaaaccagtcaaaacctggcaccaaacaggg
ttggccacgaaaattttggatactattaagaagcttaattatgagaagccaatgccgatt
caagcgcaagccttgcccgtaattatgagtggtcgggactgcattggtattgcaaaaaca
ggatctggcaaaaccttagcatttgtcctgcccatgttgcgacacattaaggatcagcct
cctttgatgtcaggtgatgggcccattgggcttattatggctcccacaagagagcttgtt
cagcaaatccatagtgatataaagaagtttacaaaggttttgggtctcagctgtgtgcct
gtatatggaggttctggggttgctcagcagatcagtgaattgaagcgagggactgagatt
gttgtttgcaccccaggtagaatgattgatatattatgtactagtggtggtaaaattaca
aatctgcgtcgtgttacttacttggtcatggatgaagctgatcggatgtttgatatgggt
tttgaacctcaaatcacgagaatcgtccaaaatacaagacctgatcgccaaactgtgcta
ttttctgcgactttccctcgccaagttgagattttggcacgtaaagtattgaataaacct
gttgaacttcaggtaggtggtaggagtgttgtgaacaaggacattacccaactagttgag
gtaagacctgaaagtgataggttccttagactcttagaactacttggagaatggtatgag
aagggaaagatactgatttttgtccatacacaagagaagtgtgatgcactgtttaaggat
ttgcttaaatctggatatccgtgtgtatcacttcacggtggaaaggatcaaacagaccgt
gaatccacattagctgattttaagagtaatgtctgcaatatattgattgctacaagtatt
gctgctagaggtttagatgtcaaagatcttgaactagtcgttaattttgatgtccctaac
cattatgaggactacgtccatcgcgttggtagaactggccgagctggtaaaaagggatgt
gctatcacattcatctcagaggaggatgcaagatacggaccagatctcgttaaagcctta
gaattatcggaacagagtgttccagaagacctcaaggccttagctgatggcttcatggcc
aaggtgaatcaagggcttgagcaagcccacgggactggttacggtggcagtggtttcaaa
tttaatgaagaggaggacgaagtcaggagagccgcgaagaaagctcaggcgaaggagtat
gggtttgaggaggataaatcagattcagaagatgaagacgaaggaattagaaaagcaggt
ggtgacatttctcaccaagcagcacttgctcaagctttggcttctgctaccaaagcaagt
gcggctgctgcttcagtgacggcacccatgacatccgggcagctcattcaaaatggtggc
ggggtggcatcagcggtagtccctggaggtggaatgcaaacaggtggcaacgacgcagca
gccaaggcagcggctctggcagcgctgatgaatttgcagcataacttggcaaagattcag
gctgatgctatgcctgaacactatgaagcagaattggaaataaatgatttccctcaaaat
gctcgttggaaggtgacacacaaggaaacgctgggtccgatatcggaatggacaggagca
gccatcacgactcgaggtcagtactacccaccggggaagattgcaggaccgggagagagg
aagctttacttgttcattgagggcccgacggagcaatcagtcaagagggccaaggcggat
ctcaagcgggtcttggaggagattacaaatcaagcttcatcgctaccaggttcagcgcaa
cctggccgatactctgttgtctag
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