Salvia miltiorrhiza (redroot sage): 130997638
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Entry
130997638 CDS
T09291
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smil03009
]
130997638
Enzymes [BR:
smil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130997638
Ribosome biogenesis [BR:
smil03009
]
Eukaryotic type
90S particles
Helicases
130997638
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ParD_antitoxin
SLAM
P-loop_SecA
AAA_19
GARIL_Rab2_bd
Motif
Other DBs
NCBI-GeneID:
130997638
NCBI-ProteinID:
XP_057779014
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All DBs
Position
8:complement(31136498..31142029)
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AA seq
528 aa
AA seq
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MEKDTSFLFSGITFNRKKFARDFARFQEQKGVDCATDEPALLENADPVSEEVVTVRADKK
RKRKAASDPVEGFSVFKSSKSKKAVDQVDENNEDKLLLGKKEYHRQLERDALFRKKHNIH
VSGSNIPSPLQSFTELKLRHSCKSYLLRNLAELGFKEPTPIQRQAIPVLLSGRECFACAP
TGSGKTFAFVCPILMKLERASKDGIRAVILCPTRELAAQTTRECKKLVKGKKFYIKLMTK
QLAKSADFSKQPCDILISTPFRVQFAVRKRKLDLSKVEFLVLDEADKLFELGLVKQVDAV
VKACSNPSIVRSLFSATLPDTVEELARTIMHDAVRIIIGRKNSASETIKQKLVFVGSEEG
KLLALRQSFAESLNPPVLIFVQNKERAKELYNELRYDDIRADVIHADLSEVQRENAVNNF
RSGKTWVLVATDVIARGMDFKGVNCVINYDFPDSMAAYVHRIGRSGRAGRSGEAITLYTE
ADVPYLRNIANVMASSGCEVPAWIMSLAKKKWRKYRPQREAISTKHQD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacacctcttttctgttctccggtatcactttcaatcgcaaaaagttcgct
cgtgattttgccagatttcaggaacagaagggggttgattgcgccacagatgaaccagct
ttgctcgaaaatgcggatcctgtaagcgaggaagtggtgacggtgcgtgctgataagaag
aggaagagaaaagcagcttcggatccagttgaagggtttagtgtgttcaaaagttcaaaa
tcaaaaaaagcagtggatcaagtggatgaaaacaacgaagacaaacttctgcttgggaag
aaggaatatcatcggcaattggagagggatgctcttttccgaaagaaacataacattcat
gtttctgggagtaatatcccatcaccccttcagagcttcacagagttgaaattgaggcat
agctgcaaatcatacttattacgcaatctggcagaactgggttttaaagagccaacacca
atccaaaggcaggctattccagtcttgttatctggaagggagtgctttgcttgtgcacct
actggttctgggaaaacttttgcatttgtctgcccaattcttatgaaacttgagcgtgct
tcaaaggatggcattcgggcagtgatcctttgcccaacacgcgaattagcagctcagaca
actcgagaatgcaagaagttggttaaaggaaagaagttttacatcaagcttatgaccaag
cagctcgctaaaagtgctgatttttcaaagcagccttgtgacattctcatatccacgcct
ttcagggtgcagtttgcagttcgcaaaagaaagcttgatttgagcaaggtcgaatttctt
gtcctggatgaagctgacaagctttttgaattaggtttggtgaagcaggttgatgcagtg
gtcaaagcatgctcaaatccttcaatcgtgcgctctctattcagtgctactttgcctgat
actgttgaagagcttgcccgcacaattatgcatgatgcagtccgaataattattggccga
aaaaattctgcttctgaaacaattaagcaaaagctcgtgtttgtaggaagtgaggaaggc
aagcttcttgctcttcgtcaaagctttgcagagagtttgaatcccccggtgctaattttt
gtacaaaacaaggagcgagctaaagaactctataatgaactgagatatgatgatattaga
gctgatgtcatacatgctgatctttcagaagtacagagagaaaatgctgttaataatttt
cgatcggggaaaacatgggtattggttgccactgatgttattgctcgcggcatggacttt
aaaggcgtcaattgtgtaatcaactatgattttccagattctatggctgcatatgttcat
aggattggccgttctggcagggctgggaggagcggagaggcaataacgttgtatactgaa
gccgacgtgccttatctacggaacatagcgaatgtaatggcatcttcgggttgcgaggtg
cctgcttggatcatgtccttagccaagaaaaaatggaggaagtacaggcctcaaagggaa
gccatttctaccaaacatcaagattaa
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