Salvia miltiorrhiza (redroot sage): 130997652
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Entry
130997652 CDS
T09291
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smil
Salvia miltiorrhiza (redroot sage)
Pathway
smil00040
Pentose and glucuronate interconversions
smil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130997652
Enzymes [BR:
smil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130997652
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130997652
NCBI-ProteinID:
XP_057779031
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Position
8:complement(30419651..30421774)
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AA seq
330 aa
AA seq
DB search
MGLQLPYGNLDSSLRGLAGQAEGFGRFAVGGQNGAVYPVTTLADDGPGSLRYGCRKKEAV
WIIFQVSGTIQLSSYLSVSSYKTIDGRGQKIKLTGKGLRLKECEHVIICNLRLEGGVGAD
ADAIQIKPNSHHIWIDRCSLSDFADGLVDISRQSTDITISRCHFANHNKTILIGADPSHV
GDRCMRVTIHHCFFDGTRQRHPRVRFGRVHLYNNYTTNWGIYAVCASVDSQVYSQCNIYE
AGHKKIAFKYYKEKAGDKDEECSGWIKSEGDLFVGETESGLVECGGEGSVFDPCEYYQKW
TVAPPTHELKHYLQHCTGCQHICLPSHSLN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcagttgccgtacggaaacttagattccagcctgcggggtttggcgggccaa
gctgagggcttcgggcgttttgctgtcggcggccaaaacggcgccgtttaccccgtcacc
actctagctgatgatgggcctggttcactacgctatggctgtcgtaaaaaggaagctgtg
tggatcatattccaagtgtcaggcaccatccagctctcatcttatctgagcgtctcgtct
tacaagaccatcgacgggcgcggtcagaaaattaagctcaccggcaaaggtctgaggttg
aaggagtgcgagcatgtcataatctgcaacctacgactcgaggggggcgtcggagccgat
gccgacgccattcagatcaagcctaattcgcaccatatatggatagaccgttgcagcctc
agtgattttgccgatggactcgtagatatcagccgtcagagcacagacattactatctca
cggtgccattttgctaaccataacaagacaatcctgattggtgccgatccttcgcatgta
ggtgatagatgcatgcgggttacgattcaccattgtttctttgatggcacgcggcagagg
cacccgcgcgtgagatttgggagagttcatttgtacaataattacaccacaaactgggga
atctatgctgtttgtgccagtgtcgactctcaggtttactcacagtgcaacatatacgaa
gcaggacataagaagatcgcctttaagtactacaaggaaaaggcaggtgataaggatgag
gagtgcagcgggtggattaaatctgaaggcgacttatttgttggcgaaacagagtcaggg
ttggtggaatgcggcggcgagggttctgtatttgatccatgcgaatactaccagaaatgg
actgtggcgccgcccacacatgaactcaaacactatcttcaacactgcaccggatgccaa
catatctgcctaccttctcactcactcaattga
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